DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and AT3G26560

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_189288.1 Gene:AT3G26560 / 822264 AraportID:AT3G26560 Length:1168 Species:Arabidopsis thaliana


Alignment Length:1035 Identity:259/1035 - (25%)
Similarity:425/1035 - (41%) Gaps:202/1035 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    23 RQTGPKNRQRFLCEVRVEPNTYIGVGNSTNKKDAEKNACRDFVNYLVRVGKLNTNDVPADAGASG 87
            |:...:||.|...|             |...:|.::|..||......|..:.|..|   :.|...
plant   122 RREEDRNRDRDRRE-------------SGRDRDRDRNRDRDDRRDRHRDRERNRGD---EEGEDR 170

  Fly    88 GGPRTGLEGAGMAGGSGQQKRVFDGQSGPQDLGEAYRPLNHDGGDGGNR---YSVI-DRIQEQRD 148
            ...|...|.....||.|:.:|        :|.......:..|.| |.|.   |.|. .|:....|
plant   171 RSDRRHRERGRGDGGEGEDRR--------RDRRAKDEYVEEDKG-GANEPELYQVYKGRVTRVMD 226

  Fly   149 MNEAEAFD--------VNAAIHGNWTIENAKE----RLNIYKQTNNIRDDYKYT----PVGPEHA 197
            ......||        |:.:......::.|||    .:.:|.:..:|..| ||:    .|.....
plant   227 AGCFVQFDKFRGKEGLVHVSQMATRRVDKAKEFVKRDMEVYVKVISISSD-KYSLSMRDVDQNTG 290

  Fly   198 RSFLAELSIYVPALNRTVTARESGSNKKSASK-----SCALSLVRQLFHLNVIEPFSGTLKKKKD 257
            |..       :|....:.....|.||....:|     ...:|.:| :...|.:.|....|||...
plant   291 RDL-------IPLRKPSDEDDSSRSNPSYRTKDGQVTKTGISGIR-IVEENDVAPSRRPLKKMSS 347

  Fly   258 EQLKPYPVKLSPNLINKID-----------------------EVIKGLDLPVVNPRNIKIELDGP 299
            .: :....:|..:.:.::|                       |:....|.|.......:..:|..
plant   348 PE-RWEAKQLIASGVLRVDEFPMYDEDGDGMLYQEEGAEEELEIEMNEDEPAFLQGQTRYSVDMS 411

  Fly   300 PIPLIVN----LSR-------IDSSQQDGEKRQESSVI---------PWAPPQANWNTWHACNID 344
            |:.:..|    |||       :...:::..::|:.:::         ||..|.......|...  
plant   412 PVKIFKNPEGSLSRAAALQSALTKERREMREQQQRTMLDSIPKDLNRPWEDPMPETGERHLAQ-- 474

  Fly   345 EGELATTSIDDLSM-DYERSLRDRRQNDNEYRQ--FLEFREKLPIAAMRSEILTAINDNPVVIIR 406
              ||....:....| ::::....:.....:..:  ..|.||.|||..::.|::.|::||.|:::.
plant   475 --ELRGVGLSAYDMPEWKKDAFGKTPTFGQRSKLSIQEQRESLPIYKLKKELIQAVHDNQVLVVI 537

  Fly   407 GNTGCGKTTQIAQYILDDYICSGQGGY---ANIYVTQPRRISAISVAERVARERCEQLGDTVGYS 468
            |.||.|||||:.||:       .:.||   ..|..|||||::|:|||:|||.|...:||:.|||:
plant   538 GETGSGKTTQVTQYL-------AEAGYTTKGKIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYA 595

  Fly   469 VRFESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYP 531
            :|||.. ..|...|.:.|.|:|||:  ::..|...|.|::||.|||.:::|.|..:|:.::....
plant   596 IRFEDC-TGPDTVIKYMTDGMLLREILIDENLSQYSVIMLDEAHERTIHTDVLFGLLKKLMKRRL 659

  Fly   532 DLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDE 596
            ||.:|:.|||:|..|||.||..|.:..:|||.|||                              
plant   660 DLRLIVTSATLDAEKFSGYFFNCNIFTIPGRTFPV------------------------------ 694

  Fly   597 EQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLP 661
                       ||.|.|..|..|               :...|:..|.:|:....  |.|||||.
plant   695 -----------EILYTKQPETDY---------------LDAALITVLQIHLTEPE--GDILVFLT 731

  Fly   662 GWNLI-------FALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNI 719
            |...|       :..||.|..     :..:..|||.:|.:|.:.|.::|:|.|.|..|::::|||
plant   732 GQEEIDSACQSLYERMKGLGK-----NVPELIILPVYSALPSEMQSRIFDPPPPGKRKVVVATNI 791

  Fly   720 AETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRA 784
            ||.|:|||.|.:|:|...|:..::.....|.|......|:.:.:||.|||||..||.|:.|.:.:
plant   792 AEASLTIDGIYYVVDPGFAKQNVYNPKQGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYTES 856

  Fly   785 RFQ-ALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDA 848
            .:: .:.....||:.|..|....||:|.:.:..:..|  ..::||...|:|.|...|..:..||.
plant   857 AYRNEMPPTSIPEIQRINLGMTTLTMKAMGINDLLSF--DFMDPPQPQALISAMEQLYSLGALDE 919

  Fly   849 NDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKA 913
            ...||.|||.:|..|:||.|.||::.....||:|.:..|.:...| ..:|.....::..|:.::|
plant   920 EGLLTKLGRKMAEFPLEPPLSKMLLASVDLGCSDEILTMIAMIQT-GNIFYRPREKQAQADQKRA 983

  Fly   914 LSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQ 973
            .......||:.::...:.|:.:...|.     :|....:|..::....|.::|||.::.:
plant   984 KFFQPEGDHLTLLAVYEAWKAKNFSGP-----WCFENFIQSRSLRRAQDVRKQLLSIMDK 1038

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683 10/46 (22%)
DSRM_DHX9_rpt2 167..241 CDD:380684 17/86 (20%)
DEXHc_DHX9 326..559 CDD:350730 83/249 (33%)
HrpA 378..>889 CDD:441249 172/523 (33%)
OB_NTP_bind 1002..1079 CDD:400182
AT3G26560NP_189288.1 GH2-like_DHX8 9..76 CDD:409668
S1_DHX8_helicase 214..290 CDD:240189 16/76 (21%)
HrpA 513..>1137 CDD:441249 184/605 (30%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.