DRSC/TRiP Functional Genomics Resources

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Protein Alignment mle and AT2G47680

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_182290.1 Gene:AT2G47680 / 819381 AraportID:AT2G47680 Length:1015 Species:Arabidopsis thaliana


Alignment Length:637 Identity:178/637 - (27%)
Similarity:276/637 - (43%) Gaps:121/637 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   384 LPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAIS 448
            |||.||:..|:..|.:|.|.:|.|..||||::|:.|::|       :...|.|..|||||.:.::
plant    26 LPIMAMKRRIIDKILENRVTLIVGEPGCGKSSQVPQFLL-------EANMAPILCTQPRRFAVVA 83

  Fly   449 VAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLL-RKLEAGLRGVSH--IIVDEIH 510
            ||:.||:.|...||..:||.:....:.... ..|||.|.|||| ..|:.||..:.:  ||:||:|
plant    84 VAKMVAKSRNSDLGGEIGYHIGHSKILTEG-SKILFKTAGVLLDEMLDKGLNALKYKVIILDEVH 147

  Fly   511 ERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYF---GICPVLEVPGRAFPVQQ---- 568
            ||.|.||.:||.::..:....||.|:|||||.|.|::..||   |....:||.....|.|:    
plant   148 ERSVESDLVLVCVKQFLMKNNDLRVVLMSATADITRYRDYFKELGRGERVEVVAIPSPDQRTIFQ 212

  Fly   569 ---FFLEDII-------QMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKT 623
               .:||.:.       .::.:.|.........|::.|.|.|..|.                   
plant   213 RRVLYLEQVAGLLGVSSDLSAYCPGPSPSSADTEIKPELQNLIHDL------------------- 258

  Fly   624 RNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQIL 688
                              .|.:|.|..:|..:||||||.:   ::|.:.......|..:.:..||
plant   259 ------------------ILYIHEKEPDIEKSILVFLPTY---YSLEQQYHQLEPFFASFEVHIL 302

  Fly   689 PCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYA 753
              |..|. .||......:.....|:||:|||||:|:||..:.:|||.|::....:.......:..
plant   303 --HRSID-TEQALAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWDPSRKRDAVQ 364

  Fly   754 TVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTI---KLLRLG 815
            .||.|::..|||:||.||...|..:.|...|.|..||::..|.:.:..|.:..|.|   :...:.
plant   365 LVWVSRSQAEQRRGRTGRTCDGEVYRLVPSAFFNKLEEHEPPSILKLSLRQQVLHICCTESRAIN 429

  Fly   816 SIHHFLSKALEPPPVDAVIEAEVLLREMRCLDAND----ELTPLGRLLARLPIE-------PRLG 869
            ..:..|:||::||..|.|.:|..:|..::.|..:.    |.|..|||||..|:.       .:.|
plant   430 DANALLAKAMDPPDPDVVDDALRMLLSIQALRKSPRGRYEPTFYGRLLASFPLSFDASILVVKFG 494

  Fly   870 KMMVL--GAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANH----QKALSGTKCSDHVAM--I 926
            :|.:|  |.:.|     .:|.:........|..|.......:|    .|.:||.: .:.|.|  .
plant   495 EMGMLRQGILLG-----VLMDTLPLPIHHPFGDDSLFLEYVDHYFGGSKTISGGR-REMVLMANF 553

  Fly   927 VASQMWRR---EKQRGEHM-------------------EARFCDWKGLQMST 956
            .|.|.|:|   :|.|.|::                   |..:||:..:..|:
plant   554 CAFQFWQRVFKDKHRLENLKQLLSKEKDKDLKLMFPEIEKEWCDFHNIAQSS 605

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684
DEXHc_DHX9 326..559 CDD:350730 70/180 (39%)
HrpA 378..>889 CDD:441249 159/540 (29%)
OB_NTP_bind 1002..1079 CDD:400182
AT2G47680NP_182290.1 HrpA 24..>482 CDD:441249 152/506 (30%)
DEXHc_RHA-like 42..188 CDD:438707 60/153 (39%)
YTH1 624..>779 CDD:227416
Blue background indicates that the domain is not in the aligned region.

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