DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and MEE29

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_181077.3 Gene:MEE29 / 818101 AraportID:AT2G35340 Length:1044 Species:Arabidopsis thaliana


Alignment Length:1024 Identity:275/1024 - (26%)
Similarity:430/1024 - (41%) Gaps:227/1024 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 QDLGEAYRPLNHDGGDGGNRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKER-------- 173
            :|.....|.::.|..||..  |..:|:::||:..|.|              ::.:||        
plant   146 EDKRNVRRKVSEDEDDGTE--SEEERLRDQREREELE--------------QHLRERDTARTRKL 194

  Fly   174 ----LNIYKQTNNIRDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSASKSCALS 234
                ::..:|...:|.|........|..|.|                :.:....|:...|  .|.
plant   195 TEPKMSKKEQEEFVRRDSAVDKGDIESLRKF----------------SWQEYMKKRKQKK--VLE 241

  Fly   235 LVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKLSPNLINKIDEVIKGLDLPVVNPRNIKIELDGP 299
            |...:..    ||:....:|..:.:::.:..|      .:|.|:||.......|....::.    
plant   242 LKDDIED----EPYLFGDEKLTEREIREFRYK------REIYELIKKSTQEEDNVGEYRMP---- 292

  Fly   300 PIPLIVNLSRIDSSQQDG----EKRQESSVIPWAP--------PQANWNTWHACNIDEGELA--- 349
                       |:..|.|    |||...||..:..        |.|....|....|:...|.   
plant   293 -----------DAYDQQGSVDQEKRFAVSVQRYRDMGSAEKMNPFAEQEAWEDHQIENAALKFGA 346

  Fly   350 -------------TTSIDDLSM------DYERSLRDRRQND----NEYRQFLEFREKLPIAAMRS 391
                         ...||.:..      :||..:..:...|    :.:....|.|:.|||...|.
plant   347 KNKEVSDNYEFVFEDQIDFIKASVLAGDNYEDEMHAKPSQDSAGKSAFHMLQEDRKALPIYTYRD 411

  Fly   392 EILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGY---ANIYVTQPRRISAISVAERV 453
            ::|.|:.|:.|:||.|.||.||||||.||:       .:.||   ..:..|||||::|:|||.||
plant   412 QLLNAVKDHQVLIIVGETGSGKTTQIPQYL-------HEAGYTKLGKVGCTQPRRVAAMSVAARV 469

  Fly   454 ARERCEQLGDTVGYSVRFESVFPRPYGAIL-FCTVGVLLRKL--EAGLRGVSHIIVDEIHERDVN 515
            |:|...:||..||||:|||......  .|| :.|.|:|||:|  |..|...|.|||||.|||.:.
plant   470 AQEMGGKLGHEVGYSIRFEDCTSEK--TILKYMTDGMLLRELLGEPDLGSYSVIIVDEAHERTLR 532

  Fly   516 SDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDF 580
            :|.|..:::|:....|||.:::.|||:|..|||.:|...|:...|||.:||      ||...|  
plant   533 TDILFGLVKDIARARPDLKLLISSATMDAEKFSDFFDQAPIFRFPGRRYPV------DICFTT-- 589

  Fly   581 VPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLM 645
            .|.|                  |..:|.|.                              ..|.:
plant   590 APEA------------------DYMDAAIT------------------------------TVLTI 606

  Fly   646 HIKSKNIP-GAILVFLPGWNLIFALMKFLQN------TNIFGDTSQYQILPCHSQIPRDEQRKVF 703
            |:|.   | |.:||||||...|.|:.:.|::      |.|    .:..|.|.::.:|.:.|.|:|
plant   607 HVKE---PLGDVLVFLPGQEEIEAVEENLKHKIRGLGTKI----RELIICPIYANLPSELQAKIF 664

  Fly   704 EPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGR 768
            ||.|||..|::|:|||||||:|||.|.:|:|...::||.:.....:.|......||.:..||.||
plant   665 EPTPEGARKVVLATNIAETSLTIDGIKYVVDPGFSKMKSYNPRTGMESLLVTPISKASATQRTGR 729

  Fly   769 AGRVRPGFCFTLCSRAR-FQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLS-KALEPPPVD 831
            |||..||.|:.|.:... :..||||..||:.||.|..:.|::|.|   .||:.|: ..::|||.:
plant   730 AGRTSPGKCYRLYTAFNYYNDLEDNTVPEIQRTNLASVVLSLKSL---GIHNLLNFDFMDPPPSE 791

  Fly   832 AVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCAD-LMAIMASYSSTFS 895
            |:|::..||..:..|:...|||..||.:|..|::|.|.||:|:...:.|:| :::|.|..|...|
plant   792 ALIKSLELLFALGALNQLGELTKAGRRMAEFPLDPMLSKMIVVSDKYKCSDEIISIAAMLSIGPS 856

  Fly   896 EVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVI 960
            ..:.....|....|..|........||:|.:.....|:.     .:...::|....:|:.:|...
plant   857 IFYRPKDKQVHADNAMKNFHVGNVGDHIAFLKIYNSWKE-----TNYSTQWCYENYIQVRSMKRA 916

  Fly   961 WDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTTE 1025
            .|.:.||..||::.          |:|...:.::  ||.....:..|.:|:..      |:....
plant   917 RDIRDQLEGLLERV----------EIDVSSNANE--LDSIRKSIVAGFFPHTA------KLQKNG 963

  Fly  1026 SKAALLHKTSVN---CSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSP 1071
            |...:.|..:|:   .|.|:...| .:.|:.:.:.|.....:|::.:.|
plant   964 SYRTVKHPQTVHIHPASGLSQVLP-RWVVYHQLVLTSKEYMRQVTELKP 1011

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 12/85 (14%)
DEXHc_DHX9 326..559 CDD:350730 91/272 (33%)
HrpA 378..>889 CDD:441249 190/526 (36%)
OB_NTP_bind 1002..1079 CDD:400182 13/73 (18%)
MEE29NP_181077.3 DUF5401 <77..>282 CDD:375164 31/179 (17%)
HrpA 403..>1031 CDD:441249 223/708 (31%)
Blue background indicates that the domain is not in the aligned region.

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