DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and Dhx34

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_001258381.1 Gene:Dhx34 / 684903 RGDID:1584452 Length:1143 Species:Rattus norvegicus


Alignment Length:880 Identity:254/880 - (28%)
Similarity:387/880 - (43%) Gaps:217/880 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   372 NEYRQ----FLEFREK---------------LPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQI 417
            :|:|:    :|:|::|               ||||...:.||..:.::.||::.|:|||||:||:
  Rat   132 SEFRRALLHYLDFQQKQAFGRLAKLQRERAALPIAQYGNRILQTLKEHQVVVVAGDTGCGKSTQV 196

  Fly   418 AQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGA- 481
            .||:|       ..|::::..||||||:.||:|:||..|...|.|..|||.:||||.  |.... 
  Rat   197 PQYLL-------AAGFSHVACTQPRRIACISLAKRVGFESLSQYGSQVGYQIRFEST--RSAATK 252

  Fly   482 ILFCTVGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDT 544
            |:|.|||:|||::  |..|.....:||||:|||.:::||||.:|:.::...|||.||||||||:.
  Rat   253 IVFLTVGLLLRQIQCEPRLPQYQVLIVDEVHERHLHNDFLLGVLQRLLPQRPDLKVILMSATINI 317

  Fly   545 TKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEI 609
            :.||.||...||::||||.||:...:...         .||....:.|..|....|         
  Rat   318 SLFSSYFSHAPVVQVPGRLFPITVVYQPQ---------EAEQSASKSEKLDPRPFL--------- 364

  Fly   610 NYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQ 674
            ...:..::||..:.|                             |.:||||.|...|..::...|
  Rat   365 RVLEAIDNKYPPEER-----------------------------GDLLVFLSGMAEISTVLDAAQ 400

  Fly   675 NTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKAR 739
            .....  |.::.:||.||.:...:|.|||:..|.||.|.||||||||||:|||.|.||:|..|.:
  Rat   401 AYATL--TQRWVVLPLHSALSVADQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVK 463

  Fly   740 MKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHE 804
            ...:.....|......|.|:.:.|||||||||..||.|:.|.:.:.:.|......||:.|..|..
  Rat   464 EMSYDPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRLYAESDYDAFAPYPVPEIRRVALDA 528

  Fly   805 MALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLG 869
            :.|.:|.:.:|....|  ..:||||..:|..|.:.|::...||:::.|||:|.|||:||::..:|
  Rat   529 LVLQMKSMSVGDPRTF--PFIEPPPAASVETAILYLQDQGALDSSEALTPIGSLLAQLPVDVVIG 591

  Fly   870 KMMVLGAVFGCAD-LMAIMASYS----STFSEVFSLD--IGQRRLANHQKALSGTKCSDHVAMIV 927
            |||:||::|..|: ::.|.|:.|    .|.|...:||  ..:|.|.:.|        .|...:..
  Rat   592 KMMILGSMFSLAEPVLTIAAALSVQSPFTRSAQSNLDCATARRPLESDQ--------GDPFTLFN 648

  Fly   928 ASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMI---------- 982
            ....|.:.|........::|..:|::...:..:.:.::|..:||:..|......:          
  Rat   649 VFNAWVQVKSERSGNSRKWCRRRGVEEHRLYEMANLRRQFKELLEDHGLLRGAQVVAPRDSYSRL 713

  Fly   983 --------------------------------------SHE--VDERIDGDDPVLDV-------- 999
                                                  .||  ..:|.|..| :.||        
  Rat   714 QQRRERQTLHQLKRQHEEGGGRRRKVLRLQEDGCSSDEDHEGSASQRADSVD-IQDVKFKLRHNL 777

  Fly  1000 ----------------SLALLCL----GLYPNICV-------HKEKRKVLTTESK-AALLHKTSV 1036
                            .||||.|    ||||.:.|       .|:..::..|::| ..:||.|.|
  Rat   778 EQLQAAASSAQDLTRDQLALLKLVLGRGLYPQLAVPDAFNSGRKDSDQIFHTQAKQGTVLHPTCV 842

  Fly  1037 NCSNLAVTFPYPFFVFGEKIRTR--------AVSCKQ--LSMVS----------------PLQVI 1075
            ..::     |......|.:...|        .:|||.  |:.||                .||.:
  Rat   843 FANS-----PEVLHTQGPEASGREGSQDGKDQMSCKHQLLAFVSLLETNKPYLVNCVRIPALQSL 902

  Fly  1076 LFGSRKIDLAAN-NIVRVDNWLNFDI-EPELAAKI 1108
            |..||.||...: :.:..|.||...: :.|.|.::
  Rat   903 LLFSRSIDTNGDCSRLVADGWLELQLADSESAVRL 937

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634
DEXDc 393..569 CDD:214692 83/178 (47%)
DEXDc 402..542 CDD:238005 67/142 (47%)
ATP-synt_B <584..644 CDD:304375 8/59 (14%)
Helicase_C 643..772 CDD:278689 50/128 (39%)
HA2 842..926 CDD:214852 30/90 (33%)
OB_NTP_bind 974..1078 CDD:285018 37/215 (17%)
Dhx34NP_001258381.1 HrpA 155..>687 CDD:224557 200/599 (33%)
OB_NTP_bind 798..909 CDD:400182 28/115 (24%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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