DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and DHX35

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_068750.2 Gene:DHX35 / 60625 HGNCID:15861 Length:703 Species:Homo sapiens


Alignment Length:703 Identity:198/703 - (28%)
Similarity:318/703 - (45%) Gaps:117/703 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 REKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILD-DYICSGQGGYANIYVTQPRRI 444
            |:|||:..:|:.||..|.:...|:|.|.|||||:|||.||:.: .:...|:    .:.||||||:
Human    51 RQKLPVFKLRNHILYLIENYQTVVIVGETGCGKSTQIPQYLAEAGWTAEGR----VVGVTQPRRV 111

  Fly   445 SAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL--EAGLRGVSHIIVD 507
            :|::||.|||.||...||..|||.:||:....:....|.|.|.|:|:|::  :..|...|.|::|
Human   112 AAVTVAGRVAEERGAVLGHEVGYCIRFDDCTDQLATRIKFLTDGMLVREMMVDPLLTKYSVIMLD 176

  Fly   508 EIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFG----------ICPVLEVPGR 562
            |.|||.:.:|..:.:|:.:.....||.:|:.|||:|..||..:|.          .|.:|.|.||
Human   177 EAHERTLYTDIAIGLLKKIQKKRGDLRLIVASATLDADKFRDFFNQNETSDPARDTCVILTVEGR 241

  Fly   563 AFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAM 627
            .|||..|:|:.  .:.|::.|.        ||...::...:.|                      
Human   242 TFPVDIFYLQS--PVPDYIKST--------VETVVKIHQTEGD---------------------- 274

  Fly   628 AMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGW-------NLIFALMKFLQNTNIFGDTSQY 685
                                      |.:|.||.|.       :::....:.|..|   |.....
Human   275 --------------------------GDVLAFLTGQEEVETVVSMLIEQARALART---GMKRHL 310

  Fly   686 QILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLT 750
            ::||.::.:|..||.||||.|...|.|:|::||:|||||||..||:|||....:::.:.....:.
Human   311 RVLPMYAGLPSFEQMKVFERVSRSVRKVIVATNVAETSITISGIVYVIDCGFVKLRAYNPRTAIE 375

  Fly   751 SYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLG 815
            ....|..|:.:..||.||.||.|.|.|:.|.:...|..|..:..|||.|:.|..:.|.:|.|.:.
Human   376 CLVVVPVSQASANQRAGRGGRSRSGKCYRLYTEEAFDKLPQSTVPEMQRSNLAPVILQLKALGID 440

  Fly   816 SI--HHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELT-PLGRLLARLPIEPRLGKMMVLGAV 877
            ::  .||:|    |||..::::|..||..:..||.:..|| |||..:|..|:.|...||::....
Human   441 NVLRFHFMS----PPPAQSMVQALELLYALGGLDKDCRLTEPLGMRIAEFPLNPMFAKMLLESGN 501

  Fly   878 FGCA-DLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEH 941
            |||: ::::|.|...  ...:|.:...|:..|.........:..||:.|:...:.:.:..:..:.
Human   502 FGCSQEILSIAAMMQ--IQNIFVVPPNQKSHAIRVHRKFAVEEGDHLTMLNIYEAFIKHNKDSKW 564

  Fly   942 MEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCL 1006
            .:..|.::|||..:.     ..::||..||          :..:|..:....||  |:.|..:..
Human   565 CQEHFLNYKGLVRAA-----TVREQLKKLL----------VKFQVPRKSSEGDP--DLVLRCIVS 612

  Fly  1007 GLYPNICVHKEKRKVLTTESKAAL-LHKTSVNCSNLAVTFPYPFFVFGEKIRT 1058
            |.:.|...........|......| :|..||    |....|..:.::.|.|:|
Human   613 GFFANAARFHSTGAYRTIRDDHELHIHPASV----LYAEKPPRWVIYNEVIQT 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634
DEXDc 393..569 CDD:214692 72/188 (38%)
DEXDc 402..542 CDD:238005 56/142 (39%)
ATP-synt_B <584..644 CDD:304375 3/59 (5%)
Helicase_C 643..772 CDD:278689 42/135 (31%)
HA2 842..926 CDD:214852 22/85 (26%)
OB_NTP_bind 974..1078 CDD:285018 17/86 (20%)
DHX35NP_068750.2 DEXDc 53..224 CDD:214692 68/174 (39%)
DEXDc 73..211 CDD:238005 56/141 (40%)
DEAH box 176..179 2/2 (100%)
HELICc 301..396 CDD:197757 36/97 (37%)
HA2 465..549 CDD:214852 22/85 (26%)
OB_NTP_bind 584..683 CDD:285018 21/94 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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