DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and tdrd9

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_001123984.1 Gene:tdrd9 / 553222 ZFINID:ZDB-GENE-090313-193 Length:1342 Species:Danio rerio


Alignment Length:820 Identity:252/820 - (30%)
Similarity:394/820 - (48%) Gaps:161/820 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   308 SRIDSSQQ----DGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLSMDYERSLRDRR 368
            |.:.|.::    ||.:|::.:.:|..|                   .||...|: .||..:    
Zfish    48 SELSSPEKEKSDDGNQRRKRAQLPTGP-------------------GTSPPSLA-SYEYPI---- 88

  Fly   369 QNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYI-----CS 428
                           |||...|.|:::.|.:|.||||||.||.|||||:.|:|||.|.     | 
Zfish    89 ---------------LPITKNRQELVSLIENNSVVIIRGATGSGKTTQLPQFILDHYAERNIPC- 137

  Fly   429 GQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK 493
                  |:.|||||:|.|..:|..|||||...||..|||.|..|.: ...:..:::.|.||||:|
Zfish   138 ------NLVVTQPRKIGATGIARWVARERKCTLGSLVGYQVGLEKM-ATEHTKLIYVTTGVLLQK 195

  Fly   494 LEAG--LRGVSHIIVDEIHERDVNSDFLLVILRDMV---DTYPDLHVILMSATIDTTKFSKYFG- 552
            |.:.  |...|||.:||:|||....||||:::|.::   ..|  :.||||||||:..:|::||| 
Zfish   196 LVSSKTLTEYSHIFIDEVHERSEELDFLLLVVRKLLRSNSRY--VKVILMSATINCIEFAEYFGS 258

  Fly   553 -----ICP--VLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEIN 610
                 :.|  |.||.|..:.|::::|:::..|   :|...:.         :..|.:|....|..
Zfish   259 PIRNQMNPAYVFEVEGAPYAVEEYYLDELKTM---LPVGVNL---------DLTLPQDPYITEEM 311

  Fly   611 YNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNI-------PGAILVFLPGWNLI-- 666
            ||.            |::::.    ||:.:|| ..|.:|:..       .|::||||||...|  
Zfish   312 YNV------------AVSLIQ----SFDEMEA-KDHRRSEQTGSTTHPERGSVLVFLPGLAEIQY 359

  Fly   667 --FALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVF-EPVPEGVTKIILSTNIAETSITIDD 728
              .||.|.::        .:.|:.|.||.:..:||..|| .||| |..||||||||||:|:|:.|
Zfish   360 MKEALSKLVR--------KRLQVYPLHSTVTLEEQNGVFLVPVP-GYRKIILSTNIAESSVTVPD 415

  Fly   729 IVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNL 793
            :.:|||.|..|........|.......|||||:..||:||||||..|||:.|.:|..::....|.
Zfish   416 VKYVIDFCLVRQLACDKETNYRCLRITWASKTSCNQRRGRAGRVSKGFCYRLVTRHFWENEIPNF 480

  Fly   794 T-PEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDA--------N 849
            : |||.|:||....|.:|||.:|.....||.||.||.:..:....:.|:::..|..        :
Zfish   481 SIPEMLRSPLASTLLKVKLLDMGDPRSVLSTALTPPILGDIERTVLQLKQIGALSVQSNSQRQFD 545

  Fly   850 DELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKAL 914
            .:||.|||:||:||::.:|||::|||.||||.:...|:|: |.:....|::. ..::||.::..|
Zfish   546 GDLTFLGRVLAQLPVDLQLGKLIVLGHVFGCLEECLIIAA-SLSLKSFFAMP-SLQQLAGYRSKL 608

  Fly   915 SGTK--CSDHVAMIVASQMWRREKQRGE--HMEARFCDWKGLQMSTMNVIWDAKQQLLDL----- 970
            |..:  .||.:|.:.|.:.|...:.:||  |.:... :|.......:..|.:..:...||     
Zfish   609 SFAQNVPSDFIAYVNAFKAWYTSRAKGELRHPKDEL-EWGKENCIQIKRIREVAELFEDLKKRVS 672

  Fly   971 -----LQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTTESKAAL 1030
                 :..:..|.:....|:  :|.     :|.|.:|   ..|:||.....|..:.|.::..:..
Zfish   673 RFNMHISSSSNPTDYTSLHK--QRF-----ILQVVIA---GALFPNYFSQGEIDEQLASKELSGN 727

  Fly  1031 LHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVS 1070
            ..||::...||.   |:.|..: :::::....|.|:..::
Zfish   728 DPKTTILIRNLP---PFAFLCY-KQLQSLFRQCGQVKSIA 763

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634
DEXDc 393..569 CDD:214692 82/193 (42%)
DEXDc 402..542 CDD:238005 68/149 (46%)
ATP-synt_B <584..644 CDD:304375 10/59 (17%)
Helicase_C 643..772 CDD:278689 55/140 (39%)
HA2 842..926 CDD:214852 31/93 (33%)
OB_NTP_bind 974..1078 CDD:285018 19/97 (20%)
tdrd9NP_001123984.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 31..81 9/51 (18%)
DEXDc 84..262 CDD:214692 83/206 (40%)
DEXDc 106..247 CDD:238005 68/150 (45%)
DEAH box. /evidence=ECO:0000250|UniProtKB:Q14BI7 211..214 2/2 (100%)
Helicase_C 343..459 CDD:278689 53/124 (43%)
HA2 530..622 CDD:214852 31/93 (33%)
TUDOR 851..972 CDD:278965
TUDOR 905..954 CDD:119391
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D278674at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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