DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and pea

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_610928.1 Gene:pea / 36561 FlyBaseID:FBgn0086895 Length:1242 Species:Drosophila melanogaster


Alignment Length:1012 Identity:262/1012 - (25%)
Similarity:435/1012 - (42%) Gaps:225/1012 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   117 QDLGEAYRPLNHDGGDGGNRYSVIDRIQEQRDMNEAEAFDVNAAIHGNWTIENAKERLNIYKQTN 181
            ||.|:...||:|...|.          :..||.|....|..:.::            ||:  |.|
  Fly   360 QDSGKDLNPLSHAPEDD----------ESLRDRNPDGPFSSSTSM------------LNL--QGN 400

  Fly   182 NIRDDYKYTPVGPEH-ARSFLAELSIYVPALNRTVTARESGSNKKSASKSCALSLVRQLFHLNVI 245
            .:.        |.|| :|..:..:|                |.::...|....|.|.....:...
  Fly   401 GME--------GDEHESRKRVTRIS----------------SPERWEIKQMISSGVLDRSEMPDF 441

  Fly   246 EPFSGTLKKKKDEQ-------LKPYPVKLSPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPIPL 303
            :..:|.|.|.:|::       ::..|..||.:          |..|..::|..|....||.....
  Fly   442 DEETGLLPKDEDDEADIEIEIVEEEPPFLSGH----------GRALHDLSPVRIVKNPDGSLAQA 496

  Fly   304 IVNLSRIDSSQQDGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLSMDYERSLRDRR 368
            .:..|.:...:::.:..|....|...|...|.| |              ||.|..|..|||....
  Fly   497 AMMQSALSKERREQKMLQREQEIEAMPTSLNKN-W--------------IDPLPEDESRSLAANM 546

  Fly   369 Q-------NDNEYRQ-----------------FLEFREKLPIAAMRSEILTAINDNPVVIIRGNT 409
            :       ...|:::                 .:|.|:.|||..:|.:::.|:.||.::|:.|.|
  Fly   547 RGMAAAPPEVPEWKKHVIGGKKSSFGKKTDLTLVEQRQSLPIYKLRDDLIKAVTDNQILIVIGET 611

  Fly   410 GCGKTTQIAQYILDDYICSGQGGY---ANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRF 471
            |.||||||.||:       |:.|:   ..|..|||||::|:|||:|||.|...:||..|||::||
  Fly   612 GSGKTTQITQYL-------GECGFTARGKIGCTQPRRVAAMSVAKRVAEEYGCRLGQEVGYTIRF 669

  Fly   472 ESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLH 534
            |.. ..|...|.:.|.|:|||:  :||.|:..|.|::||.|||.:::|.|..:|:..|...|:|.
  Fly   670 EDC-TSPETIIKYMTDGMLLRECLMEAELKSYSVIMLDEAHERTIHTDVLFGLLKTAVQKRPELK 733

  Fly   535 VILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQL 599
            :|:.|||:|..|||:||...|:..:|||.|||                                 
  Fly   734 LIVTSATLDAVKFSQYFFKAPIFTIPGRTFPV--------------------------------- 765

  Fly   600 LSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPG-- 662
                    |:.|.|..|..|               :...|:..:.:|::..  ||.||:||.|  
  Fly   766 --------EVLYTKEPETDY---------------LDASLITVMQIHLREP--PGDILLFLTGQE 805

  Fly   663 -----WNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAET 722
                 ..:::..||     ::..|..:..|||.:|.:|.:.|.::|:|.|.|..|::::||||||
  Fly   806 EIDTACEILYERMK-----SLGPDVPELIILPVYSALPSEMQTRIFDPAPAGSRKVVIATNIAET 865

  Fly   723 SITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ 787
            |:|||.|.:|:|....:.|::.|...:.|......|:...:||.|||||..||..:.|.:.   :
  Fly   866 SLTIDGIFYVVDPGFVKQKVYNSKTGMDSLVVTPISQAAAKQRAGRAGRTGPGKTYRLYTE---R 927

  Fly   788 ALEDNL----TPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDA 848
            |..|.:    .||:.||.|....|.:|.:.:..:.||  ..::.|||::::.|...|..:..||.
  Fly   928 AYRDEMLPTPVPEIQRTNLATTVLQLKTMGINDLLHF--DFMDAPPVESLVMALEQLHSLSALDD 990

  Fly   849 NDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKA 913
            ...||.|||.:|..|:||.|.||:::.....|:|.:..:.|..|. ..||.....::.||:.:||
  Fly   991 EGLLTRLGRRMAEFPLEPNLSKMLIMSVALQCSDEILTIVSMLSV-QNVFYRPKDKQALADQKKA 1054

  Fly   914 LSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPE 978
            .......||:.::.....|:..|     ....:|....:|:.|:....|.::|||.::.:     
  Fly  1055 KFNQAEGDHLTLLAVYNSWKNNK-----FSNAWCYENFVQIRTLKRSQDVRKQLLGIMDR----- 1109

  Fly   979 ECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKVLTT--ESKAALLHKTSVNCSNL 1041
                 |::|....|.:.| .:..| :|.|.:.| ...|:.::...|  :|:...:|.:|      
  Fly  1110 -----HKLDVVSAGKNSV-RIQKA-ICSGFFRN-AAKKDPQEGYRTLVDSQVVYIHPSS------ 1160

  Fly  1042 AVTFPYP-FFVFGEKIRTRAVSCKQLSMVSPLQVILF 1077
            |:....| :.::.|.::|.....::::.:.|..::.|
  Fly  1161 ALFNRQPEWVIYHELVQTTKEYMREVTTIDPKWLVEF 1197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 13/74 (18%)
DEXHc_DHX9 326..559 CDD:350730 92/261 (35%)
HrpA 378..>889 CDD:441249 172/526 (33%)
OB_NTP_bind 1002..1079 CDD:400182 15/79 (19%)
peaNP_610928.1 GH2-like_DHX8 7..74 CDD:409668
S1_DHX8_helicase 285..363 CDD:240189 2/2 (100%)
HrpA 578..>1203 CDD:441249 210/721 (29%)
Blue background indicates that the domain is not in the aligned region.

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