DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and Rhau

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_610056.1 Gene:Rhau / 35339 FlyBaseID:FBgn0032883 Length:942 Species:Drosophila melanogaster


Alignment Length:977 Identity:303/977 - (31%)
Similarity:482/977 - (49%) Gaps:116/977 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly   203 ELSIYVPALNRTVTARESGSNKKSASKSCALSLVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKL 267
            ::.:|...|.|. ..::.|.|.:|......|.       .||..| ||.|::.| |.::.|  ..
  Fly    25 DIGLYYRNLARQ-QKKDRGENAESKEPQIRLG-------CNVSAP-SGVLERVK-ELMEDY--SR 77

  Fly   268 SPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPIPLIVNLSRIDSSQQDGEKRQESSVIPWAPPQ 332
            :|:..|             |:.:|:..:..    ....:|..::..:...|.::.::.:.|..|:
  Fly    78 APSRQN-------------VDDKNVDAKFQ----QQFRHLLSVNFEEFVAETKERNADLDWVNPK 125

  Fly   333 ANWNTWHACNIDEGELATTSIDDLSMDYERSLRDRRQNDNEYRQFLEFREKLPIAAMRSEILTAI 397
                      :||         .|.::.     .:||.:...::.||.|:|||......:|:.|:
  Fly   126 ----------LDE---------RLQLEL-----GQRQLEENAKKRLEARKKLPTMKYADDIIQAV 166

  Fly   398 NDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLG 462
            .:|.|::|.|:||||||||:.|.:|||.|..|......|..|||||||||::||.|:.||||.||
  Fly   167 RENQVILIVGSTGCGKTTQVPQILLDDAISRGCASSCRIICTQPRRISAIAIAEWVSYERCESLG 231

  Fly   463 DTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDFLLVILRD 525
            ::|||.:|.||...|...:|.:||.||||::|::.  :..:|.:|:||||||.|.:|.|:.:|:.
  Fly   232 NSVGYQIRLESRKARERASITYCTTGVLLQQLQSDPLMHNLSVLILDEIHERSVETDLLMGLLKV 296

  Fly   526 MVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKR 590
            ::...|||.|||||||:....|..||..||:..:.|..|||:..:|||::..|::.......|:.
  Fly   297 ILPHRPDLKVILMSATVREQDFCDYFNNCPMFRIEGVMFPVKMLYLEDVLSKTNYEFQKFRDRRP 361

  Fly   591 KEVEDEEQLLSEDKDEAEIN-YNKVCEDKYSQKTRNAMAM-LSESDVSFELLEALLMHIKSKNIP 653
            |....|.::    |.||.|. |.:...:.|..:..:.:.: .||.....:.:..|:.:|......
  Fly   362 KRDPPERRM----KHEAMIEPYLRRIRNSYDSRVLDKLRLPESEGCEDIDFIADLVYYICENEPE 422

  Fly   654 GAILVFLPGWNLIFALMKFLQNTNIFGDTSQYQ-------ILPCHSQIPRDEQRKVFEPVPEGVT 711
            |||||||||::.|..|...|....    ||:.|       :.|.||.:...||:.||...|.|..
  Fly   423 GAILVFLPGYDKISQLYNILDKPK----TSKGQRWRDHMAVFPLHSLMQSGEQQAVFRRPPAGQR 483

  Fly   712 KIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGF 776
            |:|:||.|||||:||||:|:||:..:.:...:....|:.|...||.:|.|.:||:|||||||||.
  Fly   484 KVIISTIIAETSVTIDDVVYVINSGRTKATNYDIETNIQSLDEVWVTKANTQQRRGRAGRVRPGI 548

  Fly   777 CFTLCSRARFQALEDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLR 841
            |:.|.||||...::|..|||:.|:.|..:.|::|||.:...:.||...:..|..:|:.....||:
  Fly   549 CYNLFSRAREDRMDDIPTPEILRSKLESIILSLKLLHIDDPYRFLQTLINAPNPEAIKMGVELLK 613

  Fly   842 EMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFS------- 899
            .:..||....|||||..||:|||:|::|||:::.|:|.|.|.:...|:..|..|..:|       
  Fly   614 RIEALDQTGTLTPLGMHLAKLPIDPQMGKMILMSALFCCLDPITSAAAALSFKSPFYSPLGKESR 678

  Fly   900 LDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGLQMSTMNVIWDAK 964
            :|..:||:|.:.:       |||  ::|.:.:......|..|.|..||....|...|:..:...|
  Fly   679 VDEIKRRMARNMR-------SDH--LMVHNTIIAYRDSRYSHAERDFCYKNFLSSMTLQQLERMK 734

  Fly   965 QQLLDLLQQAGF--PEEC--MISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKEKRKV---- 1021
            .|..:||....|  ...|  ..|::..|:|    |:|   .|::..|||||:...::.|::    
  Fly   735 NQFSELLYNYKFLASSNCKDAASNKNSEKI----PLL---RAIIGAGLYPNMAHLRKSRQIKNRV 792

  Fly  1022 ------LTTESKAALLHKTSVNCSNLAVTFPYPFFVFGEKIRTRAVSCKQLSMVSPLQVILFGSR 1080
                  .|.:.:....|.:|||.....  |...:||:.::.::..:.....:||.|:.:|:||..
  Fly   793 RAIHTMATDDGRRVNFHPSSVNSGESG--FDSAYFVYFQRQKSTDLFLLDSTMVFPMALIIFGDG 855

  Fly  1081 -KIDLAANN-IVRVDNWLNFDIEPELAAKIGALKPALEDLITVACDNPSDILRLEEPY-AQLVKV 1142
             :..:..|. .:.|.....|....|.|..:..|:..||.|:......|:.|  .|..| .||:|.
  Fly   856 VEAGVTQNTPYLCVAKTYYFKCNRETADVVIQLRSNLEKLLLKKALYPAPI--EENGYEKQLIKA 918

  Fly  1143 VK 1144
            ::
  Fly   919 IE 920

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 7/37 (19%)
DEXHc_DHX9 326..559 CDD:350730 94/234 (40%)
HrpA 378..>889 CDD:441249 207/521 (40%)
OB_NTP_bind 1002..1079 CDD:400182 20/86 (23%)
RhauNP_610056.1 HrpA 160..>664 CDD:441249 202/511 (40%)
OB_NTP_bind 767..856 CDD:400182 22/93 (24%)
Blue background indicates that the domain is not in the aligned region.

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