DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and Dhx16

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_997661.1 Gene:Dhx16 / 294232 RGDID:1302963 Length:1044 Species:Rattus norvegicus


Alignment Length:988 Identity:254/988 - (25%)
Similarity:414/988 - (41%) Gaps:243/988 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   100 AGGSGQQKRVFDGQSGPQDLGEAYRPLNHDGGDGGNRYSVIDRIQEQRDMNEAEAFDVNAAIHGN 164
            |..||  ||...|...|.:    .:|.:.|..:...|    :|:|   |:.|.:||         
  Rat   141 ASESG--KRKTGGSKSPTE----EKPASEDEWERTER----ERLQ---DLEERDAF--------- 183

  Fly   165 WTIENAKERLNIYKQTNNI--RDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSA 227
              .|..::|..  .:|.|:  |.|.|......:..:....:....||.|           .|||.
  Rat   184 --AERVRQRDK--DRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPEL-----------RKKSR 233

  Fly   228 SKSCALSLVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKLSPNLINKIDEVIKG-LDLPVVNPRN 291
            .:                     .|.|::.|:|:....:|:.      :||:.| ::|.....|.
  Rat   234 RE---------------------YLAKREREKLEDLEAELAD------EEVLFGDVELSRHERRE 271

  Fly   292 IKIELDGPPIPLIVNLSRIDSSQQDGEK------------------------RQESSVIPWAPPQ 332
            :|.:      ..:.:|:|...:..:.||                        .:||..     |.
  Rat   272 LKYK------RRVRDLAREYRAAGEQEKLEATNRYHMPKETRGQPARATDIVEEESGA-----PG 325

  Fly   333 ANWNTWHACNIDEGELATTSID--------------DLSMDYERSLRDRRQNDNE---------- 373
            .....|....:|...|...:.|              |.::::.|:.  :.|.|.|          
  Rat   326 EEQRRWEEARLDAASLKFGARDAAAQEPQYQLVLEEDETIEFVRAA--QLQGDEEPSSGPPLSAQ 388

  Fly   374 --YRQFLE-FREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYA- 434
              .::.:: .|..||:...|.|:||||.::.|:||.|.||.||||||.||:.::       ||. 
  Rat   389 AQQKESIQAVRRSLPVFPFREELLTAIANHQVLIIEGETGSGKTTQIPQYLFEE-------GYTK 446

  Fly   435 ---NIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKL-- 494
               .|..|||||::|:|||.|||||...:||:.||||:|||.. ......:.:.|.|:|||:.  
  Rat   447 KGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVGYSIRFEDC-TSERTVLRYMTDGMLLREFLS 510

  Fly   495 EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEV 559
            |..|...|.::|||.|||.:::|.|..:::|:....|:|.|::.|||:||.:||.:|...||..:
  Rat   511 EPDLASYSVVMVDEAHERTLHTDILFGLIKDVARFRPELKVLVASATLDTARFSAFFDDAPVFRI 575

  Fly   560 PGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTR 624
            |||.|||..|:.:        .|.|:                         |.:.|         
  Rat   576 PGRRFPVDIFYTK--------APEAD-------------------------YLEAC--------- 598

  Fly   625 NAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQN--TNIFGDTSQYQI 687
                          ::..|.:|:...  ||.|||||.|...|.|..:.||:  ..:.....:..:
  Rat   599 --------------VVSVLQIHVTQP--PGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLV 647

  Fly   688 LPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSY 752
            ||.::.:|.|.|.::|:|.|.|..|::::|||||||:||:.|::|:|....:.|.:.....:.|.
  Rat   648 LPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESL 712

  Fly   753 ATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQ-ALEDNLTPEMFRTPLHEMALTIKLLRLGS 816
            .....||.:..||.||||||..|.||.|.:...:| .||:...||:.||.|..:.|.:|.|.:..
  Rat   713 TVTPCSKASANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHD 777

  Fly   817 IHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCA 881
            :.||  ..|:|||.:.::.|...|..:..|:...|||..||.:|.||::|.|.||::....:.|:
  Rat   778 LMHF--DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS 840

  Fly   882 DLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARF 946
            :.:..:|:..|..:.:|.....:...|::.:........||:.::.....|..     ....:::
  Rat   841 EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAE-----SGYSSQW 900

  Fly   947 CDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPN 1011
            |....:|..:|....|.::||..||::                       ::|.|. .|.|.|..
  Rat   901 CYENFVQFRSMRRARDVREQLEGLLER-----------------------VEVGLT-SCQGDYVR 941

  Fly  1012 ICVHKEKRKVLTT 1024
            :      ||.:|:
  Rat   942 V------RKAITS 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 13/75 (17%)
DEXHc_DHX9 326..559 CDD:350730 89/265 (34%)
HrpA 378..>889 CDD:441249 175/520 (34%)
OB_NTP_bind 1002..1079 CDD:400182 6/23 (26%)
Dhx16NP_997661.1 PTZ00121 <146..>410 CDD:173412 57/338 (17%)
HrpA 401..>1028 CDD:441249 197/651 (30%)
Blue background indicates that the domain is not in the aligned region.

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