DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and Dhx8

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_659080.2 Gene:Dhx8 / 217207 MGIID:1306823 Length:1244 Species:Mus musculus


Alignment Length:973 Identity:251/973 - (25%)
Similarity:423/973 - (43%) Gaps:207/973 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   169 NAKERLNIYKQTNNIRDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSASKSCAL 233
            |...|.|:..:||  .:.....|..|.|. |.::...:...:|.|....|.|...|..       
Mouse   371 NPNRRRNLVGETN--EETSMRNPDRPTHL-SLVSAPEVEDDSLERKRLTRISDPEKWE------- 425

  Fly   234 SLVRQLFHLNVI--EPF------SGTLKKKKDEQLKPYPVKLSPNLINKIDEVIKGLDLPVVNPR 290
              ::|:...||:  |.|      :|.|.|..||:.:...::    |:.:....::|         
Mouse   426 --IKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIE----LVEEEPPFLRG--------- 475

  Fly   291 NIKIELDGPPIPLIVN----LSRIDSSQ----------QDGEKRQESSVIP------WAPPQANW 335
            :.|..:|..||.::.|    ||:....|          :..::..|...||      |..|..: 
Mouse   476 HTKQSMDMSPIKIVKNPDGSLSQAAMMQSALAKERRELKQAQREAEMDSIPMGLNKHWVDPLPD- 539

  Fly   336 NTWHACNIDEGELATTSIDDLSMDYERSLRDRRQND-NEYRQ-----------------FLEFRE 382
                    .||.....::..:.|         ..|| .|:::                 .||.||
Mouse   540 --------AEGRQIAANMRGIGM---------MPNDIPEWKKHAFGGNKASYGKKTQMSILEQRE 587

  Fly   383 KLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYAN---IYVTQPRRI 444
            .|||..::.:::.|::||.::|:.|.||.||||||.||:       .:.||.:   |..|||||:
Mouse   588 SLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYL-------AEAGYTSRGKIGCTQPRRV 645

  Fly   445 SAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRK--LEAGLRGVSHIIVD 507
            :|:|||:||:.|....||..|||::|||.. ..|...|.:.|.|:|||:  ::..|...:.|::|
Mouse   646 AAMSVAKRVSEEFGCCLGQEVGYTIRFEDC-TSPETVIKYMTDGMLLRECLIDPDLTQYAIIMLD 709

  Fly   508 EIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPVQQFFLE 572
            |.|||.:::|.|..:|:..|....|:.:|:.|||:|..|||:||...|:..:|||.:||      
Mouse   710 EAHERTIHTDVLFGLLKKTVQKRQDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPV------ 768

  Fly   573 DIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKVCEDKYSQKTRNAMAMLSESDVSF 637
                                               ||.|.|..|..|               :..
Mouse   769 -----------------------------------EILYTKEPETDY---------------LDA 783

  Fly   638 ELLEALLMHIKSKNIPGAILVFLPG-------WNLIFALMKFLQNTNIFGDTSQYQILPCHSQIP 695
            .|:..:.:|:...  ||.|||||.|       ..:::..||     ::..|..:..|||.:|.:|
Mouse   784 SLITVMQIHLTEP--PGDILVFLTGQEEIDTACEILYERMK-----SLGPDVPELIILPVYSALP 841

  Fly   696 RDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKT 760
            .:.|.::|:|.|.|..|::::|||||||:|||.|.:|:|....:.|::.|...:........|:.
Mouse   842 SEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQA 906

  Fly   761 NLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLT---PEMFRTPLHEMALTIKLLRLGSIHHFLS 822
            ..:||.|||||..||.|:.|.:...::  ::.||   ||:.||.|....|::|.:.:..:..|  
Mouse   907 QAKQRAGRAGRTGPGKCYRLYTERAYR--DEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSF-- 967

  Fly   823 KALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIM 887
            ..::.||::.:|.|...|..:..||....||.|||.:|..|:||.|.||:::....||::.|..:
Mouse   968 DFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTI 1032

  Fly   888 ASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQRGEHMEARFCDWKGL 952
            .|..|. ..||.....::.||:.:||.......||:.::.....|:..|     ....:|....:
Mouse  1033 VSMLSV-QNVFYRPKDKQALADQKKAKFHQTEGDHLTLLAVYNSWKNNK-----FSNPWCYENFI 1091

  Fly   953 QMSTMNVIWDAKQQLLDLLQQAGFPEECMISHEVDERIDGDDPVLDVSLALLCLGLYPNICVHKE 1017
            |..::....|.::|:|.::.:          |::|....|...| .|..| :|.|.:.| ...|:
Mouse  1092 QARSLRRAQDIRKQMLGIMDR----------HKLDVVSCGKSTV-RVQKA-ICSGFFRN-AAKKD 1143

  Fly  1018 KRKVLTT--ESKAALLHKTSVNCSNLAVTFPYP-FFVFGEKIRTRAVSCKQLSMVSPLQVILF 1077
            .::...|  :.:...:|.:|      |:....| :.|:.|.:.|.....::::.:.|..::.|
Mouse  1144 PQEGYRTLIDQQVVYIHPSS------ALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEF 1200

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 15/71 (21%)
DEXHc_DHX9 326..559 CDD:350730 85/261 (33%)
HrpA 378..>889 CDD:441249 169/525 (32%)
OB_NTP_bind 1002..1079 CDD:400182 15/79 (19%)
Dhx8NP_659080.2 GH2-like_DHX8 25..92 CDD:409668
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 152..289
S1_DHX8_helicase 289..367 CDD:240189
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 361..396 7/26 (27%)
HrpA 580..>1211 CDD:441249 206/721 (29%)
DEAH box 709..712 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.

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