DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and dhx34

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_001121459.1 Gene:dhx34 / 100158553 XenbaseID:XB-GENE-1009178 Length:1133 Species:Xenopus tropicalis


Alignment Length:1088 Identity:287/1088 - (26%)
Similarity:459/1088 - (42%) Gaps:268/1088 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 NWTIENAKERLNIYKQTNNIRDDYKYTPVGPEHARSFLAELSIYVPALNRTVTARESGSNKKSAS 228
            ||...|.:.:|.     .....:..|.....|.::.|.    ::.....|....::.|...|..:
 Frog    11 NWDCPNTRRQLE-----ELFFSEQGYIKANSEDSKEFW----VFFDRFQRFQKMQKRGDKCKGRT 66

  Fly   229 KSCALSLVRQLFHLNVIEPFSGTLKKKKDEQLKPYPVKLSPNLINKIDEVIKGLDLP-VVNPRNI 292
            ..               |.:||:||                             ||| |.:||  
 Frog    67 DK---------------EKYSGSLK-----------------------------DLPKVYDPR-- 85

  Fly   293 KIELDGPPIPLIVNLSRIDSSQQDGEKRQESSVIPWAPPQANWNTWHACNIDEGELATTSIDDLS 357
                      ..:|.|.|.|  :|.||.:.:.|..:.            :.|...:....:::..
 Frog    86 ----------YRINFSIIQS--KDVEKSRHNHVKEYR------------SRDCRSIPREKLEEFK 126

  Fly   358 MDYERSLR-DRRQNDNEYRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYI 421
            |.....|. .::|:..:..:..:.|..|||...:.:|::.::.:.||::.|:|||||:||:.||:
 Frog   127 MSVLHYLDFTQKQSFAKLVKLRKERSSLPIFQYKEKIISMVHKHQVVVVAGDTGCGKSTQVPQYL 191

  Fly   422 LDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCT 486
            |       ..|:.:|..||||||:.||:|:||..|...|.|..|||.:|||| ...|...|:|.|
 Frog   192 L-------AAGFGHIACTQPRRIACISLAKRVGFESLNQYGSKVGYQIRFES-SRSPATKIVFIT 248

  Fly   487 VGVLLRKL--EAGLRGVSHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSK 549
            .|:|||::  ::.|.....|||||:|||.::|||||.:||.::...|||.||||||||:...||.
 Frog   249 EGLLLRQIQRDSTLPQYQVIIVDEVHERHLHSDFLLGVLRQLLILRPDLKVILMSATINIKLFSG 313

  Fly   550 YFGICPVLEVPGRAFPVQQFFLEDIIQMTDFVPSAESRRKRKEVEDEEQLLSEDKDEAEINYNKV 614
            ||...|||:||||.||:|..:..        :|..|:..|.::::....|          :..:.
 Frog   314 YFEQAPVLQVPGRLFPIQVIYQP--------IPQEETVSKSEKLDPRPYL----------HVLQA 360

  Fly   615 CEDKYSQKTRNAMAMLSESDVSFELLEALLMHIKSKNIPGAILVFLPGWNLIFALMKFLQNTNIF 679
            .:.||....|                             |.:|:||.|...|.::.:.:|   ::
 Frog   361 IDHKYPPDER-----------------------------GDLLIFLSGVTEISSVQEAVQ---VY 393

  Fly   680 G-DTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLF 743
            . .|.::.:||.||.:...:|.|||:..|.||.|.|:||||||||:|||.:.||:|..|.:...|
 Frog   394 ATHTQRWIVLPLHSTLSIADQDKVFDLAPVGVRKCIISTNIAETSVTIDGVRFVLDSGKVKEMSF 458

  Fly   744 TSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQALEDNLTPEMFRTPLHEMALT 808
            .....:......|.|:.:.|||||||||..||.|:.|.:.:.:.|......||:.|..|..:.|.
 Frog   459 DPKAKMQRLQEFWISRASAEQRKGRAGRTGPGVCYRLYAESDYDAFSPYPVPEIQRVALDSLVLQ 523

  Fly   809 IKLLRLGSIHHFLSKALEPPPVDAVIEAEVLLREMRCLDANDELTPLGRLLARLPIEPRLGKMMV 873
            :|.:.||:..||  ..:|.|.:.::..|...||:...||.|:||||:|:|||:||::..:|||::
 Frog   524 MKSMELGNPRHF--PFIEQPSMSSIETAIFYLRDQGALDINEELTPIGKLLAKLPVDVVIGKMLI 586

  Fly   874 LGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANHQKALSGTKCSDHVAMIVASQMWRREKQR 938
            ||::|...:.:..:||..|..|.:.............:|.|. ::..|...::.....|.:.|..
 Frog   587 LGSLFSLVEPVLTIASALSVQSPILRNSTSNPEWGTARKPLE-SEHGDPFTLLNIFNEWVQVKAN 650

  Fly   939 GEHMEARFCDWKGLQMSTMNVIWDAKQQLLDLLQQAGFPEECMI--------------------- 982
            ......::|..:||:...:..:.:.::|..:||:..|..||.:.                     
 Frog   651 QRSNSRKWCRRRGLEEQRLYEMANLRRQFKELLKDHGLLEENVAQRGDRNSRQRQHKERKELHQL 715

  Fly   983 --SHE-VDER---------------IDGDD---------------PVLDVSLAL----------- 1003
              .|| |::|               .||::               .:.||...|           
 Frog   716 KRQHERVEKRKRKVLKLQDEGAGSSSDGEEQYHTEKHRKDRKDSIDIQDVKFKLRHNIHELHASS 780

  Fly  1004 -----------------LCLGLYPNICV-------HKEKRKVLTTESK-AALLHKTSV-NCS--- 1039
                             :|.||||.:.|       .|:..:|..|::| ..:||.|.| :|:   
 Frog   781 STGQDLSSQEVSLLKLIVCHGLYPQLGVPDSFNSCRKDSDQVFHTKNKQGVVLHPTCVFSCNPEL 845

  Fly  1040 ---------------NLAVTFPYPFFVFGEKIRTR---AVSCKQLSMVSPLQVILFGSRKIDLAA 1086
                           |...:..:....|...:.|.   .|:|.:|   |.||..|..:|.||.:|
 Frog   846 LQVNSEEESAGNESGNKGQSSRHQIVAFVSLLETNKPYLVNCVRL---SALQGFLLLARCIDTSA 907

  Fly  1087 N--NIVRVDNWLNFDIE-PE----LAAKIGALKPALEDLITVACDNPS 1127
            :  .|| .|.|:..::: ||    |..:...|:.|||.|:....:.||
 Frog   908 DCCRIV-CDKWMEMNVDNPESALCLITEAVQLRVALEKLLKSRLEKPS 954

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634 7/69 (10%)
DEXDc 393..569 CDD:214692 86/177 (49%)
DEXDc 402..542 CDD:238005 69/141 (49%)
ATP-synt_B <584..644 CDD:304375 6/59 (10%)
Helicase_C 643..772 CDD:278689 47/129 (36%)
HA2 842..926 CDD:214852 26/83 (31%)
OB_NTP_bind 974..1078 CDD:285018 37/215 (17%)
dhx34NP_001121459.1 DEXDc 149..329 CDD:214692 87/187 (47%)
DEXDc 171..306 CDD:238005 69/142 (49%)
HELICc 402..488 CDD:197757 40/85 (47%)
HA2 557..638 CDD:214852 26/81 (32%)
OB_NTP_bind 762..903 CDD:285018 29/143 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D222681at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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