DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and dhx57

DIOPT Version :10

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:NP_001163976.1 Gene:dhx57 / 100124795 XenbaseID:XB-GENE-976876 Length:1180 Species:Xenopus tropicalis


Alignment Length:948 Identity:308/948 - (32%)
Similarity:471/948 - (49%) Gaps:173/948 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   143 IQEQRDMNEAEAFDVNAAIHGN----------WTI----ENAKERLNIYKQTNNIRDDYKYTP-- 191
            ::|..:..:.||| |..:|.|.          ||:    :...:||...|:.::.:|.::..|  
 Frog   245 VEECLERRQEEAF-VLQSICGEKFVERIPNKVWTVGLEMDYLTKRLQKPKKKDSDKDLFQQMPRN 308

  Fly   192 -----VGPEHAR----------------------------SFLAELSIYVPALNR---TVTARES 220
                 :..|:.|                            :.|.||.:..|..|:   .......
 Frog   309 ICKYYMKGENCRFGSKCRFKHEAPKQNFKDESHLCANGNNNCLYELEVRFPKDNKYPYQAPLLAF 373

  Fly   221 GSNKKSASKSCALSLVRQLFH--LNVI---EPFSGTL---KKKKDEQLK-----------PYPVK 266
            .|..::.|..|.|.:...|:.  ||:.   :|...||   .:.:||.:|           |.|:.
 Frog   374 YSVNENLSMGCRLHITEYLYEKALNIAQTSDPAVYTLVSCLEDEDEIVKLLANTHHKYSIPPPLL 438

  Fly   267 LSPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPI------------PLIVNLSRIDSSQQDG-E 318
            |:.....:.:.||. ::.||..        |.|.:            |:.:::|:.:.:.:|. :
 Frog   439 LTATSDTRKNPVIT-INKPVAP--------DKPSLLSYPSGARKGQKPIKMDISKPNDTDEDSLD 494

  Fly   319 KRQESSVIPWAPPQAN----------WNTWHACNIDEGELATTSIDDLSMDYERSLRDRRQNDNE 373
            ..:..||:......||          :|:..|...:..::.            :..|.::...| 
 Frog   495 DLESESVLVENESYANLKKKQAKKYSFNSNKAVAAENAKIC------------KHYRAKKTTRN- 546

  Fly   374 YRQFLEFREKLPIAAMRSEILTAINDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYV 438
            |:..||.|:|||....:.:||..::...|:::.|.|||||||||.|:|||..:.......:||..
 Frog   547 YQSMLEERQKLPAWQKQDQILELLSKYQVLVVSGMTGCGKTTQIPQFILDASLKGPPSHVSNIIC 611

  Fly   439 TQPRRISAISVAERVARERCEQLGDTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGV 501
            ||||||||||||||||:||.|::|.:|||.:|.||| ......:|:||.|||||:||..  |:.|
 Frog   612 TQPRRISAISVAERVAQERAERVGISVGYQIRLESV-KSAATRLLYCTTGVLLRRLEGDTTLQNV 675

  Fly   502 SHIIVDEIHERDVNSDFLLVILRDMVDTYPDLHVILMSATIDTTKFSKYFGICPVLEVPGRAFPV 566
            :|::|||:|||...|||||::|:|::...|||.:||||||::...||.||..||||.:|||.|||
 Frog   676 THVVVDEVHERTEESDFLLLVLKDVMVLRPDLKIILMSATLNAELFSCYFQDCPVLHIPGRTFPV 740

  Fly   567 QQFFLEDIIQMTDFV--------------PSAESRRKRK-----EVEDE-EQLLSEDKDEAEINY 611
            .|:||||.|..|.:|              |..:|.|.:|     |:.|| ||.:|   ....|..
 Frog   741 DQYFLEDAIAKTRYVLEDGSPYQRSSKQLPGPDSARGKKGNSYNELLDELEQQIS---SSLRIQD 802

  Fly   612 NKVCED--------------KYSQKTRNAMAMLSESD---VSFELLEALLMHIKSKN---IPGAI 656
            :|:.:|              :|:..:::.:..||..|   ::.:|:||||..|.:.:   .|||:
 Frog   803 SKIVKDSVPDQQLNVKELSVRYNGISKSVIKTLSSMDLDKINLDLIEALLEWIVNGDHSYPPGAV 867

  Fly   657 LVFLPGWNLIFALMKFLQNTNIFGD--TSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNI 719
            ||||||...|..|...||:..:|.:  :.:..|.|.||.:..|||:.||...|.||||||:||||
 Frog   868 LVFLPGLAEIKTLYDQLQSNALFNNRRSKRCVIYPLHSSLSSDEQQSVFLKPPPGVTKIIISTNI 932

  Fly   720 AETSITIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRA 784
            |||||||||:|:|||..|.|.|.:....::.|....|.|:.|..|||||||||..|.||.|.:..
 Frog   933 AETSITIDDVVYVIDSGKMREKRYDPGKSMESLEDTWVSRANAMQRKGRAGRVASGVCFHLFTSH 997

  Fly   785 RFQ-ALEDNLTPEMFRTPLHEMALTIKLLRLGS---IHHFLSKALEPPPVDAVIEAEVLLREMRC 845
            .:| .|.|...||:.|.||.::.|.||:|.:.|   :....::.:|||.::::..:::.|:::..
 Frog   998 HYQYQLLDQQLPEIQRIPLEQLCLRIKILEMFSECRLDLVFARLIEPPRMESLHASKIRLQDLGA 1062

  Fly   846 LDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQRRLANH 910
            |...::|||||..||.||::.|:||:|:.||:|.|.| .|:..:.|..|...|.....::..||.
 Frog  1063 LTKEEKLTPLGYHLASLPVDVRIGKLMLFGAIFRCLD-PALTIAASLAFKSPFVCPWDKKEEANK 1126

  Fly   911 QKALSGTKCSDHVAMIVASQMWR---REKQRGEHMEAR 945
            :|....|..|||:|::.|.|.|.   :|..|..:...|
 Frog  1127 KKQEFATANSDHLALLQAYQAWSSVIKESSRAAYQYCR 1164

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM_DHX9_rpt1 2..70 CDD:380683
DSRM_DHX9_rpt2 167..241 CDD:380684 17/115 (15%)
DEXHc_DHX9 326..559 CDD:350730 102/244 (42%)
HrpA 378..>889 CDD:441249 236/558 (42%)
OB_NTP_bind 1002..1079 CDD:400182
dhx57NP_001163976.1 UBA_DHX57 185..222 CDD:270502
RWD_DHX57 246..424 CDD:467661 34/178 (19%)
zf-CCCH_4 308..329 CDD:465626 2/20 (10%)
HrpA 557..>1109 CDD:441249 233/556 (42%)
Blue background indicates that the domain is not in the aligned region.

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