DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mle and dhx37

DIOPT Version :9

Sequence 1:NP_476641.1 Gene:mle / 35523 FlyBaseID:FBgn0002774 Length:1293 Species:Drosophila melanogaster
Sequence 2:XP_005172500.1 Gene:dhx37 / 100009635 ZFINID:ZDB-GENE-030131-4505 Length:1153 Species:Danio rerio


Alignment Length:1017 Identity:242/1017 - (23%)
Similarity:392/1017 - (38%) Gaps:272/1017 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   205 SIYVPALNRTVTAR---ESGSNKKSASKSCALSLVRQLFHLNVIEPFSGTLKKKKDEQL---KPY 263
            |:...|.:|....:   :.|:..|......||.|           |.:.|.|:|.:..:   |..
Zfish    18 SVQTAAADRQTNVQVEIQDGAVLKGVDDCNALVL-----------PATKTKKQKVERPVTKKKAL 71

  Fly   264 PVKLSPNLINKIDEVIKGLDLPVVNPRNIKIELDGPPIPLIV---------NLSRIDSSQQDGEK 319
            ..|...||...:::..|......|..:..:::|....:.|:.         .|..|..|..:|:.
Zfish    72 TKKQRKNLEKVLEQKDKKAHRAEVLSKLAEVQLPEAELKLLYTTAKLGTGGKLYHIKESVNEGQD 136

  Fly   320 RQESSVIPWAPPQANWNTWHACNID----EGELATTSIDD--------LSMDYERSLRDRRQNDN 372
            ...|||...:...||.......:.:    |.|::.:|.||        ...:.|:...::...:.
Zfish   137 GGSSSVKISSLSGANRKRRREADEEEEENESEMSESSEDDDDSEESDSSEEEKEKISEEKHTEEQ 201

  Fly   373 EYRQFL----------------------------------------EFREKLPIAAMRSEILTAI 397
            :.:|.|                                        |.|.:||:.|....|:.|:
Zfish   202 QQQQVLKEETKPKEADMKEEKKAETWTKEDCKPAVFIPVERLPEIQEARLRLPVLAEEQIIMEAV 266

  Fly   398 NDNPVVIIRGNTGCGKTTQIAQYILDDYICSGQGGYANIYVTQPRRISAISVAERVARERCEQLG 462
            .|:..|::.|.||.|||||:.|::.:....| .||.  |.||:|||::|||::.|||.|.....|
Zfish   267 KDHECVVLCGETGSGKTTQVPQFLYEAGFAS-SGGI--IGVTEPRRVAAISMSHRVATEMNLSSG 328

  Fly   463 DTVGYSVRFESVFPRPYGAILFCTVGVLLRKLEAG--LRGVSHIIVDEIHERDVNSDFLLVILRD 525
             .|.|.:|:|..... ...|...|.||||::::..  |:..|.||:||.|||.|.:|.|:.:|..
Zfish   329 -VVSYQIRYEGNVTE-NTKIKVMTDGVLLKEIQRDFLLQKYSVIIIDEAHERSVYTDILIGLLSR 391

  Fly   526 MVDTYP-------DLHVILMSATI---DTTKFSKYFGI-CPVLEVPGRAFPVQQFF-----LED- 573
            :|   |       .:.:|:||||:   |.|:..:.|.. .||::|..|.|.|...|     ::| 
Zfish   392 IV---PLRNKKGLPMKLIIMSATLRVEDFTENKRLFSSPPPVIKVEARQFAVTVHFNKRTPMDDY 453

  Fly   574 -------IIQMTDFVP----------SAE----SRRKRKE------------VEDEEQL-LSEDK 604
                   |.::...:|          .||    .||.||.            :|.||.| .|:..
Zfish   454 TGETFRKICKIHRMLPPGGILVFLTGQAEVHSVCRRLRKAFPYKPNREHTDMMETEEDLKKSKRA 518

  Fly   605 DEAEINYNKVCEDKYS-----QKTRNAMAMLSE-----SDVSFELLEALLMHIKSKNIPGAILVF 659
            .:..::..::..|.||     :...:..|.:.|     ||:..||.:......:.|..|...|  
Zfish   519 KKKNVSLPRINLDNYSALPVDEGDEDRQAGIDEDDGEGSDLELELGDHPDTDHEEKADPSIPL-- 581

  Fly   660 LPGWNLIFALMKFLQNTNIFGDTSQYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSI 724
                                      .:||.:|.:..::|.|||.|.|.|....:::||:||||:
Zfish   582 --------------------------YVLPLYSLLAPEQQAKVFRPPPAGSRLCVVATNVAETSL 620

  Fly   725 TIDDIVFVIDICKARMKLFTSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSRARFQAL 789
            ||..|.:|:|..:.:.:.:.....::|:...|.|:.:..||.|||||..||.|:.|.|.|.|...
Zfish   621 TIPGIKYVVDCGRVKKRFYDRVTGVSSFKVTWISQASANQRAGRAGRTEPGHCYRLYSSAVFGDF 685

  Fly   790 EDNLTPEMFRTPLHEMALTIKLLRLGSIHHFLSKALEPPPVDAVIEAEVL--------------- 839
            ......|:.|.|:.::.|.:|.|.:..:.:|....  ||..:|:|.||.|               
Zfish   686 SLFSEAEITRRPVEDLVLQMKDLNIEKVVNFPFPT--PPSSEALIAAEELLISLGALEKPARHGR 748

  Fly   840 LREMRCLDANDELTPLGRLLARLPIEPRLGKMMVLGAVFGCADLMAIMASYSSTFSEVFSLDIGQ 904
            |.||.....:..::||||.:|..|:.||..||:.||...||...:..:.| :.|..|:|.   ..
Zfish   749 LSEMEKARLSCPISPLGRAMAAFPVAPRYAKMLALGRQQGCMQYIITIVS-AMTVREIFE---DY 809

  Fly   905 RRLANHQK---ALSGTKCSDHVAMIVASQMWRREKQR---GEHM--------------EARFCDW 949
            .|.|..::   .:||.|...    :...::|..:...   |:.|              ..:||:.
Zfish   810 DRPAGSEEENVKMSGKKARS----VQMRRLWAGQGASLLLGDLMVLLGAVGACEFAGLTPQFCEE 870

  Fly   950 KGLQMSTM---------------------NVIWDAKQ------QLLDLLQ--QAGFPEECMISHE 985
            .||:...|                     :|..|.|.      |:|.|.|  .||..:......:
Zfish   871 NGLRFKAMLEIRRLRGQLTNAVNAVCADADVYVDNKMAPPTEAQVLCLRQIVLAGLGDHIARRVQ 935

  Fly   986 VDERIDG-----------DDPVLDVSLALLCLGLYPNICVHK 1016
            .:|.:|.           ||||.          ::|:..:||
Zfish   936 AEELLDPKWRNAYKTPLLDDPVF----------IHPSSALHK 967

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mleNP_476641.1 DSRM 4..68 CDD:214634
DSRM 170..240 CDD:214634 8/37 (22%)
DEXDc 393..569 CDD:214692 69/188 (37%)
DEXDc 402..542 CDD:238005 56/148 (38%)
ATP-synt_B <584..644 CDD:304375 20/86 (23%)
Helicase_C 643..772 CDD:278689 33/128 (26%)
HA2 842..926 CDD:214852 25/86 (29%)
OB_NTP_bind 974..1078 CDD:285018 11/54 (20%)
dhx37XP_005172500.1 HrpA 200..1007 CDD:224557 207/824 (25%)
DEXDc 272..412 CDD:238005 56/147 (38%)
HELICc 583..667 CDD:197757 29/83 (35%)
HA2 730..781 CDD:282288 15/50 (30%)
HA2 761..>813 CDD:214852 19/55 (35%)
OB_NTP_bind <918..1004 CDD:285018 13/60 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG1643
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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