DRSC/TRiP Functional Genomics Resources

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Protein Alignment BubR1 and mad3

DIOPT Version :9

Sequence 1:NP_477382.1 Gene:BubR1 / 35522 FlyBaseID:FBgn0263855 Length:1460 Species:Drosophila melanogaster
Sequence 2:NP_588043.2 Gene:mad3 / 2539219 PomBaseID:SPCC1795.01c Length:310 Species:Schizosaccharomyces pombe


Alignment Length:341 Identity:85/341 - (24%)
Similarity:148/341 - (43%) Gaps:56/341 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MD-FDNAKENIQPLASGRNVSLLQASLSQDSTHGQELLAQRKQM--EEEVRTYKGA-DPLGAWYT 61
            || .:.:||||:|..:|.:.|.|..|.|::.|..:....|:::|  |.::.|.:.. |||..|..
pombe    13 MDVIEQSKENIEPRKAGHSASALAKSSSRNHTEKEVAGLQKERMGHERKIETSESLDDPLQVWID 77

  Fly    62 FICWIEQSYPAGGS-GSGLQTVLHQCLTKFEDDERYRQDKRLIKLFIKFMEKQKDKIEFYQQMYN 125
            :|.|...::|.|.: .|||.|:|.:|..:|..:..|:.|.|.::::::::....:.:|.:..:.:
pombe    78 YIKWTLDNFPQGETKTSGLVTLLERCTREFVRNPLYKDDVRYLRIWMQYVNYIDEPVELFSFLAH 142

  Fly   126 NGIGTMLADFYIAWAYSYDLSGNMRKADEIFRLGLECRAEPLEDLKEAHHHFGYTVGQRMLYSTG 190
            :.||...:.||..:|..::..|..:||||:::.|...:|:|....::.:..|.:...:....|..
pombe   143 HHIGQESSIFYEEYANYFESRGLFQKADEVYQKGKRMKAKPFLRFQQKYQQFTHRWLEFAPQSFS 207

  Fly   191 EEANAVNQ-ELNERRLALQSLHGRRQQISN---SITVGSIRTGAAVKSGLPGVVQVEPSTTTSRR 251
            ...|:||. :.......:|.:...|.:||.   ..:|.|...|:. |.|.||..|. ..|...||
pombe   208 SNTNSVNPLQTTFESTNIQEISQSRTKISKPKFKFSVYSDADGSG-KDGQPGTWQT-LGTVDQRR 270

  Fly   252 NVGRNVEVFNDENSEGNIPISNSETEVKSSLRSIIDSACSQENIKEPVAWNKANAKRHKHGKIFG 316
                         .|.||                  ||.|....|.|:   |:..|....||   
pombe   271 -------------KENNI------------------SATSWVGEKLPL---KSPRKLDPLGK--- 298

  Fly   317 SNASPDLGFDIHVDEQ 332
                    |.:|.||:
pombe   299 --------FQVHCDEE 306

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
BubR1NP_477382.1 Mad3_BUB1_I 38..159 CDD:285506 33/124 (27%)
STKc_Bub1_BubR1 1174..1458 CDD:270883
mad3NP_588043.2 Mad3_BUB1_I 52..176 CDD:214817 33/123 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 68 1.000 Domainoid score I2723
eggNOG 1 0.900 - - E1_KOG1166
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2052
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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