DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7881 and slc-17.8

DIOPT Version :9

Sequence 1:NP_001286144.1 Gene:CG7881 / 35521 FlyBaseID:FBgn0033048 Length:482 Species:Drosophila melanogaster
Sequence 2:NP_001023848.1 Gene:slc-17.8 / 179234 WormBaseID:WBGene00017798 Length:527 Species:Caenorhabditis elegans


Alignment Length:501 Identity:122/501 - (24%)
Similarity:223/501 - (44%) Gaps:66/501 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 RHMQALLLFLAIVVNYTARLSVSVAIVAMTDAATT--NLDFPE-----YNWNGVQQSYILSSFYW 70
            |.|.:::|.......:....::.:|||.|.:::.|  |..:||     .:|:..:|.||.|:|..
 Worm    53 RFMTSIMLCFCFGCVHLMNSNMGMAIVCMVNSSATYDNETYPENAAPLLDWSSDEQGYIFSAFNA 117

  Fly    71 GYIVTQFPAGFLVRRFGAKAVLLV----PTLATAVLSGLTPYCVAWGGWQAFCTIRIVEGLFQGL 131
            |.:|..|..| :..:|.||.::||    .:||...|..:.|..|.|..:.     |.:.|....|
 Worm   118 GLLVMLFTGG-MADKFNAKYMILVSVAIASLANFTLPWMAPISVYWAIFS-----RFLVGFADAL 176

  Fly   132 IFPCIHEHLAKWSPPEDRNRLGAFAYSGADCGSVLAMASSGLIANGSM---GWPGIFYVSAGTCG 193
            :.|.::..:.:|.|..:|:.....|..|...|:::.:.::|.:.:.:.   |||.|||:|.....
 Worm   177 LQPAMNSLITRWFPTSERSYALGLATGGRQIGTLIIIPAAGALCSQTEIFGGWPSIFYLSGFIGV 241

  Fly   194 LWCLLWVLFGANNAPSSRLIGSREREHIERSMKRQD-GFHAQKIPIPWRAIWSSSPFYALLVVRS 257
            |:...::..||:.......|...|.:.|..|.:.:| |....:..:||:.|..|...:|.::...
 Worm   242 LFIFSYIFLGADKPSKQSCISDNELKFITISNQSEDVGKKRTERKVPWKNILKSGAVWASVISLV 306

  Fly   258 AQGWANSTMQLQTPSYMHGVLEMDIKSNALYSALPFLAMWGMSYVYLVFADVAMS--RQWMSLT- 319
            ...:...|:.:..|||:|.|.......|.:.||||.:::|        ||.:..|  ..|:... 
 Worm   307 CHEFPLMTLIMFLPSYLHDVHHYHSTENGILSALPTVSLW--------FAKIGSSYLNTWLQKNT 363

  Fly   320 -----TLRKSINTVSYWGPAAALIGIGFLDKSQTTLAIALMTI---NAGLNAGSGIGSILTIIDM 376
                 |:.|.:|::...|....|:...|||.....:|:..:.:   :|||:..   |..|.::.:
 Worm   364 TWKKDTICKVLNSIGSIGLGVFLLAATFLDNEHAWMAVLFLCLSMASAGLHTP---GCQLALVSV 425

  Fly   377 SPNHSG------MLMAIVNGIGNIFPLLTPLLVGVIVTESDSRSQWQIVFAMTAVVFFIGNLVYL 435
            :|.:||      .....|:||  |.|::|.::|     :..:.::|.:||.::.|:.....:::.
 Worm   426 APAYSGAVTGFTFFFVAVSGI--IHPIITKMIV-----KDRTAAEWNLVFYISTVIAIFPIIIFN 483

  Fly   436 IWGTTDQQAWDAEDYLQAKDPES---ESNAHQMEFKSRTDSEAKAD 478
            :||:|:.|.|       ||...|   |.|..:|...|:..|....|
 Worm   484 VWGSTEVQWW-------AKSKASMQQEPNNKKMSKSSKASSSPSID 522

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7881NP_001286144.1 2A0114euk 12..449 CDD:129972 113/467 (24%)
MFS 18..437 CDD:119392 106/450 (24%)
slc-17.8NP_001023848.1 MFS_SLC17 57..486 CDD:340876 106/452 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG28615
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000034
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11662
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X142
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

Return to query results.
Submit another query.