DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7882 and ITR2

DIOPT Version :9

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_014538.2 Gene:ITR2 / 854050 SGDID:S000005463 Length:609 Species:Saccharomyces cerevisiae


Alignment Length:503 Identity:124/503 - (24%)
Similarity:217/503 - (43%) Gaps:86/503 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 GYCTGVMNSP-AELMRSWCNETLIASYDLNLSDAGLEILWSAIVSIFLVGGAIGSVVGATMANRF 119
            ||.||.::|. ..:.|...|:.|  :|       |.:.|.:|..|:   |..|.||...|.|:.|
Yeast   124 GYDTGYISSALISINRDLDNKVL--TY-------GEKELITAATSL---GALITSVGAGTAADVF 176

  Fly   120 GRRGC------FFICGLLLGLGAISFYACRPLRSVELLLLGRMMVGLAGGLLTSFMSMWHSEISA 178
            |||.|      .|:.|.:|.:.|..|:.         :..||:::|...|:.:....::.|||:.
Yeast   177 GRRPCLMFSNLMFLIGAILQITAHKFWQ---------MAAGRLIMGFGVGIGSLISPLFISEIAP 232

  Fly   179 LSQRSTLAPLCPMGLTLGVVIAQVC--SLRSVLGGPENWHFGLAFYGLLVLVCYAPFRWYPESPK 241
            ...|..|..:..:.||.|.:||..|  .|..|..|   |...:....:..::.::.|.:.|::|:
Yeast   233 KMIRGRLTVINSLWLTGGQLIAYGCGAGLNHVKNG---WRILVGLSLIPTVLQFSFFCFLPDTPR 294

  Fly   242 WLFIVQGRKEDARR-QLQLLRGYTAGSAALKAEMEEMEQESACEVKTSSLMQVL--RDPQLRL-- 301
            : ::::|   |.:| ::.|.|.|      :..|.|.::|:..   :.|||.|.:  ::|..:.  
Yeast   295 Y-YVMKG---DLKRAKMVLKRSY------VNTEDEIIDQKVE---ELSSLNQSIPGKNPITKFWN 346

  Fly   302 -------------PLIIVCAFLGGQQLSGINAIFYYSVSIFRKAGLSSQASEWANLGAGSLNLFA 353
                         .|||.|.....||.:|.|::.|:|.:||...|..:.::  .::.....|...
Yeast   347 MVKELHTVPSNFRALIIGCGLQAIQQFTGWNSLMYFSGTIFETVGFKNSSA--VSIIVSGTNFVF 409

  Fly   354 SMLGPVLLERVNRRPLMLFSTFFCAVFLLLFAIMLFFI-------------ESYSWFGMGCIGCI 405
            :::....::::.||.::|.......|.|::.||...|:             :.:|.:|:..|..|
Yeast   410 TLIAFFCIDKIGRRYILLIGLPGMTVALVICAIAFHFLGIKFNGADAVVASDGFSSWGIVIIVFI 474

  Fly   406 FLYIFFFQFGLGPMPFFIGAELFELATRPAAMSLGSLAYWLCNFIIGMAFPTM-QNLWGALVFLP 469
            .:|..|:..|:|.:| :..:|||....|....|..:...|..:.:|...|.|| ||:.....|..
Yeast   475 IVYAAFYALGIGTVP-WQQSELFPQNVRGVGTSYATATNWAGSLVIASTFLTMLQNITPTGTFSF 538

  Fly   470 FS-VTCLLIFGLTKRYLPETRGRHPSEVAPLVALGFK---SKVMLPKQ 513
            |: |.||........| ||..|....||..::..||.   ||.:..|:
Yeast   539 FAGVACLSTIFCYFCY-PELSGLELEEVQTILKDGFNIKASKALAKKR 585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 Sugar_tr 43..491 CDD:278511 116/476 (24%)
MFS 95..480 CDD:119392 102/425 (24%)
ITR2NP_014538.2 MFS_HMIT_like 115..556 CDD:340918 114/472 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342417
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.840

Return to query results.
Submit another query.