DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7882 and SNF3

DIOPT Version :9

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_010087.1 Gene:SNF3 / 851333 SGDID:S000002353 Length:884 Species:Saccharomyces cerevisiae


Alignment Length:564 Identity:127/564 - (22%)
Similarity:228/564 - (40%) Gaps:133/564 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 SLQEQSLTFSEAPLMAHENGKQEERPQWSWSLN-WAAIGSSLGAAVPVGYCTGVMNSPAELMRSW 72
            ::.:.|:.|||.|        |::....|..:. :.|:|..|     .||.||::||...:    
Yeast    77 TIDDNSILFSEPP--------QKQSMMMSICVGVFVAVGGFL-----FGYDTGLINSITSM---- 124

  Fly    73 CNETLIASYDLNLSDAGLEILWSAIVSIFLVGGAIGSVVGATMANRFGRR-----GCFFIC---- 128
               ..:.|:.....|:......|.:||...:|...|::....:::.:||:     ...||.    
Yeast   125 ---NYVKSHVAPNHDSFTAQQMSILVSFLSLGTFFGALTAPFISDSYGRKPTIIFSTIFIFSIGN 186

  Fly   129 GLLLGLGAISFYACRPLRSVELLLLGRMMVGLAGGLLTSFMSMWHSEISALSQRSTLAPLCPMGL 193
            .|.:|.|.|:           ||::||::.|:..|.:::.:.::.:|.:..|.|..:.......:
Yeast   187 SLQVGAGGIT-----------LLIVGRVISGIGIGAISAVVPLYQAEATHKSLRGAIISTYQWAI 240

  Fly   194 TLGVVIA-----------QVCSLRSVLGGPENWHFGLAFYGLLVLVCYAPFRWYPESPKWLFIVQ 247
            |.|::::           ...|.|..:|....|...||. |:..|         ||||:: ::::
Yeast   241 TWGLLVSSAVSQGTHARNDASSYRIPIGLQYVWSSFLAI-GMFFL---------PESPRY-YVLK 294

  Fly   248 GRKEDARRQLQLLRGYTAGSAALKAEMEEM----EQESA--------CEVKTSSLMQVLRDPQLR 300
            .:.::|.:.|..|||.....:.|..|:.|:    :.|::        |.:.:.|      .|:..
Yeast   295 DKLDEAAKSLSFLRGVPVHDSGLLEELVEIKATYDYEASFGSSNFIDCFISSKS------RPKQT 353

  Fly   301 LPLIIVCAFLGGQQLSGINAIFYYSVSIFRKAGLSSQASEWANLGAGSLNLFASMLGPVLLERVN 365
            |.:....|....||.||||.||||.|:.|.|.|:|:  |...:....::|:..::.|...:|...
Yeast   354 LRMFTGIALQAFQQFSGINFIFYYGVNFFNKTGVSN--SYLVSFITYAVNVVFNVPGLFFVEFFG 416

  Fly   366 RRPLMLFSTFFCAVFLLLFAIMLFFIESYSWFGMGC-----------IGCIFLYIFFFQFGLGPM 419
            ||.:::.......:...:.||            :||           |..|.|:|..|....|.:
Yeast   417 RRKVLVVGGVIMTIANFIVAI------------VGCSLKTVAAAKVMIAFICLFIAAFSATWGGV 469

  Fly   420 PFFIGAELFELATRPAAMSLGSLAYWLCNFIIGMAFPTMQN--------------LWGALVFLPF 470
            .:.|.|||:.|..|....::.:.|.||.|||..:..|.:.:              :||:|..:..
Yeast   470 VWVISAELYPLGVRSKCTAICAAANWLVNFICALITPYIVDTGSHTSSLGAKIFFIWGSLNAMGV 534

  Fly   471 SVTCLLIFGLTKRYLPETRGRHPSEVAPLVALGFKSK--VMLPK 512
            .|..|.::        ||:|....|:..|.   .||.  |:.||
Yeast   535 IVVYLTVY--------ETKGLTLEEIDELY---IKSSTGVVSPK 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 Sugar_tr 43..491 CDD:278511 112/504 (22%)
MFS 95..480 CDD:119392 99/441 (22%)
SNF3NP_010087.1 MFS_HXT 99..556 CDD:340914 114/518 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157342628
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm13429
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.840

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