DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7882 and PGLCT

DIOPT Version :9

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_568328.1 Gene:PGLCT / 831472 AraportID:AT5G16150 Length:546 Species:Arabidopsis thaliana


Alignment Length:505 Identity:135/505 - (26%)
Similarity:243/505 - (48%) Gaps:81/505 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 AHENGKQEERPQWSWSLNWAAIGSSLGAAVP-----------VGYCTGVMNSPAELMRSWCNETL 77
            |..:|.:||      ::...:.|.|.|..:|           .||..||:|...|.:        
plant    83 ASSDGDEEE------AIPLRSEGKSSGTVLPFVGVACLGAILFGYHLGVVNGALEYL-------- 133

  Fly    78 IASYDLNLSDAGLEILWSAIVSIFLVGGAIGSVVGATMANRFGRRGCFFICGLLLGLGAISFYAC 142
              :.||.:::.  .:|...|||..|.|..:||..|..:|::|||...|.:..:.|.:||   :.|
plant   134 --AKDLGIAEN--TVLQGWIVSSLLAGATVGSFTGGALADKFGRTRTFQLDAIPLAIGA---FLC 191

  Fly   143 RPLRSVELLLLGRMMVGLAGGLLTSFMSMWHSEISALSQRSTLAPLCPMGLTLGVVIAQVCSLRS 207
            ...:||:.:::||::.|:..|:.::.:.::.||||....|..|..:..:.:.:|::.|.:..| .
plant   192 ATAQSVQTMIVGRLLAGIGIGISSAIVPLYISEISPTEIRGALGSVNQLFICIGILAALIAGL-P 255

  Fly   208 VLGGPENWH--FGLAFYGLLVLVCYAPFRWYPESPKWLFIVQGRKEDARRQLQLLRGYTAGSAAL 270
            :...|..|.  ||:|....::|.....|.  ||||:|| :.||:..:|.:.::.|.|        
plant   256 LAANPLWWRTMFGVAVIPSVLLAIGMAFS--PESPRWL-VQQGKVSEAEKAIKTLYG-------- 309

  Fly   271 KAEMEEMEQESACEVKTSSLMQVLRDPQL-----------RLPLIIVCAFLGGQQLSGINAIFYY 324
            |..:.|:.::.:...:.||      :|:.           ::..:....|| .|||:||||:.||
plant   310 KERVVELVRDLSASGQGSS------EPEAGWFDLFSSRYWKVVSVGAALFL-FQQLAGINAVVYY 367

  Fly   325 SVSIFRKAGLSSQASEWANLGAGSLNLFASMLGPVLLERVNRRPLMLFSTFFCAVFLLLFAIMLF 389
            |.|:||.||:.|..:..|.:||.  |:|.:.:...|::::.|:.|:|.|....|:.:||.::   
plant   368 STSVFRSAGIQSDVAASALVGAS--NVFGTAVASSLMDKMGRKSLLLTSFGGMALSMLLLSL--- 427

  Fly   390 FIESYSWFGMGC-------IGCIFLYIFFFQFGLGPMPFFIGAELFELATRPAAMSLGSLAYWLC 447
               |::|..:..       :|.: ||:..|..|.||:|..:..|:|....|..|::|....:|:.
plant   428 ---SFTWKALAAYSGTLAVVGTV-LYVLSFSLGAGPVPALLLPEIFASRIRAKAVALSLGMHWIS 488

  Fly   448 NFIIGMAFPTMQNLWG-ALVFLPFSVTCLLIFGLTKRYLPETRGRHPSEV 496
            ||:||:.|.::...:| :.|:|.|:..|:|........:.||:||...|:
plant   489 NFVIGLYFLSVVTKFGISSVYLGFAGVCVLAVLYIAGNVVETKGRSLEEI 538

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 Sugar_tr 43..491 CDD:278511 128/479 (27%)
MFS 95..480 CDD:119392 113/405 (28%)
PGLCTNP_568328.1 MFS 109..524 CDD:119392 122/457 (27%)
Sugar_tr 111..539 CDD:278511 127/471 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 1 1.000 - - FOG0000120
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

Return to query results.
Submit another query.