DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7882 and INT4

DIOPT Version :9

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_001328028.1 Gene:INT4 / 827346 AraportID:AT4G16480 Length:582 Species:Arabidopsis thaliana


Alignment Length:578 Identity:138/578 - (23%)
Similarity:234/578 - (40%) Gaps:132/578 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 WSLNW-------AAIGSSLGAAVPVGYCTGVMNSPAELMRSWCNETLIASYDLNLSDAGLEILWS 95
            |...|       .|:.:.:|..: .||.|||::.....::...:|....::           |.|
plant    18 WRTTWKTPYIMRLALSAGIGGLL-FGYDTGVISGALLFIKEDFDEVDKKTW-----------LQS 70

  Fly    96 AIVSIFLVGGAIGSVVGATMANRFGRRGCFFICGLLLGLGAISF-YACRPLRSVELLLLGRMMVG 159
            .|||:.:.|..:|:.||..:.::||||....|..:|..:|||.. :|..|.    ::::||:.||
plant    71 TIVSMAVAGAIVGAAVGGWINDKFGRRMSILIADVLFLIGAIVMAFAPAPW----VIIVGRIFVG 131

  Fly   160 LAGGLLTSFMSMWHSEISALSQRSTLAPLCPMGLTLGVVIAQVCSLRSVLGGPENWHFGLAFYGL 224
            ...|:.:....::.||.|....|..|.....:.:|.|...:.:.:| :.:..|..|.:.|...|:
plant   132 FGVGMASMTSPLYISEASPARIRGALVSTNGLLITGGQFFSYLINL-AFVHTPGTWRWMLGVAGV 195

  Fly   225 LVLVCYAPFRWYPESPKWLFIVQGRKED-ARRQLQLLRGYTAGSAALKAEME----EMEQESACE 284
            ..:|.:......||||:||:    ||:. |..:..|.|.|.|..  ::||||    .:|.|.|.|
plant   196 PAIVQFVLMLSLPESPRWLY----RKDRIAESRAILERIYPADE--VEAEMEALKLSVEAEKADE 254

  Fly   285 V-----KTSSLMQVLRDPQLRLPLIIVCAFLGGQQLSGINAIFYYSVSIFRKAGLSSQASEWA-N 343
            .     .::.|.....:|.:|..|.........||..|||.:.|||.||.:.||.:|..:..| :
plant   255 AIIGDSFSAKLKGAFGNPVVRRGLAAGITVQVAQQFVGINTVMYYSPSIVQFAGYASNKTAMALS 319

  Fly   344 LGAGSLNLFASMLGPVLLERVNRRPLMLFSTFFCAVFLLLFA------------IMLFFIESYS- 395
            |....||...|::..:.::|..||.||:.|.|.....|::.|            |..|...::: 
plant   320 LITSGLNALGSIVSMMFVDRYGRRKLMIISMFGIIACLIILATVFSQAAIHAPKIDAFESRTFAP 384

  Fly   396 -------------------WFGMGCI--------------------------------------- 402
                               |..|.|:                                       
plant   385 NATCSAYAPLAAENAPPSRWNCMKCLRSECGFCASGVQPYAPGACVVLSDDMKATCSSRGRTFFK 449

  Fly   403 -GC---------IF--LYIFFFQFGLGPMPFFIGAELFELATRPAAMSLGSLAYWLCNFIIGMAF 455
             ||         :|  |||..:..|:|.:|:.:.:|::.|..|.....:.:::.|:.|.|:..:|
plant   450 DGCPSKFGFLAIVFLGLYIVVYAPGMGTVPWIVNSEIYPLRYRGLGGGIAAVSNWVSNLIVSESF 514

  Fly   456 PTMQNLWGA----LVFLPFSVTCLLIFGLTKRYLPETRGRHPSEVAPLVALGFKSKVM 509
            .::.:..|:    |:|..||...|....|   .:|||:|....||..|:.:|||..::
plant   515 LSLTHALGSSGTFLLFAGFSTIGLFFIWL---LVPETKGLQFEEVEKLLEVGFKPSLL 569

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 Sugar_tr 43..491 CDD:278511 129/546 (24%)
MFS 95..480 CDD:119392 116/483 (24%)
INT4NP_001328028.1 MFS_HMIT_like 33..547 CDD:340918 125/539 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.