DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7882 and hmit-1.3

DIOPT Version :9

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:596 Identity:137/596 - (22%)
Similarity:235/596 - (39%) Gaps:146/596 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 APLMAHENGKQ---EERPQWSWSLNWAAIGSSLGAAVPVGYCTGVMNSPAELMRSWCNETLIASY 81
            ||:.|.....|   ...|:..|.:...|..:.:|..: .||.||:: |.|.|            |
 Worm     5 APVAAGAGSGQTRPSSDPKTGWFVYMLAFSAVIGGFL-FGYDTGIV-SAAML------------Y 55

  Fly    82 DLNLSD-AGLEILWSAIVSIFLVG-GAIGSVVGATMANRFGRRGCFFICGLLLGLGAISFYACRP 144
            ..|.|. ..|:.:|..|:.....| .||||:.....::..||:.......:...:|||   .|..
 Worm    56 VPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIIIGASVTFTIGAI---ICAA 117

  Fly   145 LRSVELLLLGRMMVGLAGGLLTSFMSMWHSEISALSQRSTLAPLCPMGLTLGVVIAQVCSLRSVL 209
            ..:..:||:||:::|||.|..:..:.::.||.|....|..|.....:.:|:|:|||      :::
 Worm   118 AWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIA------NII 176

  Fly   210 GG------PE--NWHFGLAFYGLLVLVCYAPFRWYPESPKWLFIVQGRKEDARRQLQLLRGYTAG 266
            ||      |:  .|....||..:..::.:..|.:.||||:||: ..||..:||.  .|.|.|...
 Worm   177 GGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPESPRWLY-EHGRTVEARE--VLTRIYNGH 238

  Fly   267 SAALKAEMEEM----EQESACEVKTS----SLMQVLRDPQLRLPLIIVCAFLGGQQLSGINAIFY 323
            :..:..|:.|:    |:|...:.:.:    :::::|:.|.:|..:||.......|||||||.:.|
 Worm   239 TEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQMFQQLSGINTVMY 303

  Fly   324 YSVSIFRKAGL-SSQASEWANLGAGSLNLFASMLGPVLLERVNRRPLMLFSTFFCAVFLLLFAIM 387
            |:.:|.|.||: .:..:.|.::|..::|...:.:...|:|||.||.|:|.|.....:||:...:.
 Worm   304 YTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMIGVILFLIAMGVS 368

  Fly   388 LFFIES----------------------------------------------------------- 393
            ...|.:                                                           
 Worm   369 FLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSD 433

  Fly   394 ----------------------YSWFGMGC--------IGCIFLYIFFFQFGLGPMPFFIGAELF 428
                                  :.|....|        |..:..|:..|..|..|:|:.:.||.:
 Worm   434 DSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFY 498

  Fly   429 ELATRPAAMSLGSLAYWLCNFIIGMAFPTMQNLWGALVFLPFSVTC-----LLIFGLTKRYLPET 488
            .|..|..|:|:.:...|:.|.|:.:.|.::..  .|..:..|.:.|     .|:|...  ::|||
 Worm   499 PLWARSTAVSVSTACNWIFNLIVSLTFLSLSQ--AATKYGTFFIYCGCTMVALVFVFF--FVPET 559

  Fly   489 RGRHPSEVAPL 499
            :|....||..|
 Worm   560 KGYSIDEVEML 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 Sugar_tr 43..491 CDD:278511 127/560 (23%)
MFS 95..480 CDD:119392 110/496 (22%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:421695 123/553 (22%)
MFS <190..>249 CDD:421695 18/61 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160158109
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D326501at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.850

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