DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7882 and hmit-1.3

DIOPT Version :10

Sequence 1:NP_610189.2 Gene:CG7882 / 35520 FlyBaseID:FBgn0033047 Length:516 Species:Drosophila melanogaster
Sequence 2:NP_497725.2 Gene:hmit-1.3 / 175458 WormBaseID:WBGene00010811 Length:604 Species:Caenorhabditis elegans


Alignment Length:596 Identity:137/596 - (22%)
Similarity:235/596 - (39%) Gaps:146/596 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 APLMAHENGKQ---EERPQWSWSLNWAAIGSSLGAAVPVGYCTGVMNSPAELMRSWCNETLIASY 81
            ||:.|.....|   ...|:..|.:...|..:.:|..: .||.||:: |.|.|            |
 Worm     5 APVAAGAGSGQTRPSSDPKTGWFVYMLAFSAVIGGFL-FGYDTGIV-SAAML------------Y 55

  Fly    82 DLNLSD-AGLEILWSAIVSIFLVG-GAIGSVVGATMANRFGRRGCFFICGLLLGLGAISFYACRP 144
            ..|.|. ..|:.:|..|:.....| .||||:.....::..||:.......:...:|||   .|..
 Worm    56 VPNASGIKPLDSVWQEIIVSITPGVAAIGSLCSGPGSDFLGRKKIIIGASVTFTIGAI---ICAA 117

  Fly   145 LRSVELLLLGRMMVGLAGGLLTSFMSMWHSEISALSQRSTLAPLCPMGLTLGVVIAQVCSLRSVL 209
            ..:..:||:||:::|||.|..:..:.::.||.|....|..|.....:.:|:|:|||      :::
 Worm   118 AWTKIILLIGRILLGLAIGFASMIVPIYVSEASPSHIRGKLVTGFQLMITVGLVIA------NII 176

  Fly   210 GG------PE--NWHFGLAFYGLLVLVCYAPFRWYPESPKWLFIVQGRKEDARRQLQLLRGYTAG 266
            ||      |:  .|....||..:..::.:..|.:.||||:||: ..||..:||.  .|.|.|...
 Worm   177 GGAFSYVDPDQVGWRLMFAFAAVPAIIQFVCFLFLPESPRWLY-EHGRTVEARE--VLTRIYNGH 238

  Fly   267 SAALKAEMEEM----EQESACEVKTS----SLMQVLRDPQLRLPLIIVCAFLGGQQLSGINAIFY 323
            :..:..|:.|:    |:|...:.:.:    :::::|:.|.:|..:||.......|||||||.:.|
 Worm   239 TEWVDYEINEISFSYEEELRAKAEHAGNGPTIIRILKTPHVRKAMIIGSLLQMFQQLSGINTVMY 303

  Fly   324 YSVSIFRKAGL-SSQASEWANLGAGSLNLFASMLGPVLLERVNRRPLMLFSTFFCAVFLLLFAIM 387
            |:.:|.|.||: .:..:.|.::|..::|...:.:...|:|||.||.|:|.|.....:||:...:.
 Worm   304 YTGNIIRSAGVKDNHTTIWISVGTSAINFLGTFIPIALVERVGRRVLLLVSMIGVILFLIAMGVS 368

  Fly   388 LFFIES----------------------------------------------------------- 393
            ...|.:                                                           
 Worm   369 FLLINNDSLRTFDQQNYTLNYNPSVKHAAKCLKYSNCDFCVTDENCGFCESKVAKKGYCLPFPSD 433

  Fly   394 ----------------------YSWFGMGC--------IGCIFLYIFFFQFGLGPMPFFIGAELF 428
                                  :.|....|        |..:..|:..|..|..|:|:.:.||.:
 Worm   434 DSSDYSATGICEFSNLTNNGTDFEWEDTYCHTKFTVLPIIIMVFYLLSFSAGYAPLPWVLNAEFY 498

  Fly   429 ELATRPAAMSLGSLAYWLCNFIIGMAFPTMQNLWGALVFLPFSVTC-----LLIFGLTKRYLPET 488
            .|..|..|:|:.:...|:.|.|:.:.|.::..  .|..:..|.:.|     .|:|...  ::|||
 Worm   499 PLWARSTAVSVSTACNWIFNLIVSLTFLSLSQ--AATKYGTFFIYCGCTMVALVFVFF--FVPET 559

  Fly   489 RGRHPSEVAPL 499
            :|....||..|
 Worm   560 KGYSIDEVEML 570

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7882NP_610189.2 MFS_GLUT_Class1_2_like 44..491 CDD:340915 127/559 (23%)
hmit-1.3NP_497725.2 MFS 34..558 CDD:475125 123/553 (22%)
MFS <190..>249 CDD:475125 18/61 (30%)

Return to query results.
Submit another query.