DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and SRP2

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_179060.1 Gene:SRP2 / 815941 AraportID:AT2G14540 Length:407 Species:Arabidopsis thaliana


Alignment Length:512 Identity:99/512 - (19%)
Similarity:172/512 - (33%) Gaps:143/512 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1651 STRPPVKLDPSPESSQGLEASTAMMDEDLQSFARLCNELAFSYWRAITSEKISSARSLVISPFAL 1715
            |.|...:|..|..:...|..:......|:|...:..||::......:.| .::...:.|.||.::
plant     3 SKRKNQELSTSETADPSLSKTNKKQKIDMQEAMKNQNEVSLLLVGKVIS-AVAKNSNCVFSPASI 66

  Fly  1716 TSMLSMVFLGARGSTSGEMNEILK------LDDMVTFNPHLIFKNITNSV-EQASDSDIATAAFV 1773
            .::|::       :.:...|:.|:      |....|...:.||..:.:.| :..|::.....|.|
plant    67 NAVLTV-------TAANTDNKTLRSFILSFLKSSSTEETNAIFHELASVVFKDGSETGGPKIAAV 124

  Fly  1774 REIFSDRA-------NGKILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRTNLLVKRHTMGKVLE 1831
            ..::.:::       ....|.|||        ....:|:|....:.||...|....|||...:.|
plant   125 NGVWMEQSLSCNPDWEDLFLNFFK--------ASFAKVDFRHKAEEVRLDVNTWASRHTNDLIKE 181

  Fly  1832 YLRTNSV-----WVNGPLATISANLFQTDCSHGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYRS 1891
            .|...||     |:.|. |......::.......|.|:...:.        ..:.|.:|      
plant   182 ILPRGSVTSLTNWIYGN-ALYFKGAWEKAFDKSMTRDKPFHLL--------NGKSVSVP------ 231

  Fly  1892 GFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISPMDNLDRLERSLVETAFSDKQAWRRLL 1956
             |:..||.........|        .|..:|..|.    .|:.:| |.|:.......|.....||
plant   232 -FMRSYEKQFIEAYDGF--------KVLRLPYRQG----RDDTNR-EFSMYLYLPDKKGELDNLL 282

  Fly  1957 TSLMDRPG-MEVQLPRFSHRSFVNASLG---LQKMGLRGLFKSDFADLRGLTGAGNRDIFLSDMI 2017
            ..:...|| ::..:|.:      ...:|   :.|      ||.:|       |.....:|     
plant   283 ERITSNPGFLDSHIPEY------RVDVGDFRIPK------FKIEF-------GFEASSVF----- 323

  Fly  2018 QINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQESALGRGFY 2082
              |.|    |..:|.|           :|...::|....:|..::..||..||.           
plant   324 --NDF----ELNVSLH-----------QKALIEIDEEGTEAAAATTVVVVTGSC----------- 360

  Fly  2083 DDLLDPKYLELPLPLRPRQARVPDAPRLRF--DKPFLYFVRHNPTGMILFMGR-FNP 2136
              |.:||                  .::.|  |.|||:.:|.:.||.:||.|: |:|
plant   361 --LWEPK------------------KKIDFVADHPFLFLIREDKTGTLLFAGQIFDP 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 91/474 (19%)
SRP2NP_179060.1 SERPIN 36..397 CDD:294093 91/477 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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