DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and serpina3

DIOPT Version :10

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001011275.1 Gene:serpina3 / 496728 XenbaseID:XB-GENE-5933441 Length:414 Species:Xenopus tropicalis


Alignment Length:349 Identity:76/349 - (21%)
Similarity:136/349 - (38%) Gaps:86/349 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly  1699 SEKISSARSLVISPFALTSMLSMVFLGARGSTSGEMNEILKL-------DDMVTFNPHLIFKNIT 1756
            :||.|:.:::|.||.::.:..||:.|||:..:..::...|.|       :||.....||:  .:.
 Frog    61 AEKESTQKNIVFSPLSILTAFSMLLLGAKSESHQQILSGLSLNQTQVPEEDMHEAFEHLL--QVL 123

  Fly  1757 NSVEQASDSDIATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFHV---------VNDI 1812
            |..:......|..|.||.:..      |||..|.::.:..|  |.|....|.         :||.
 Frog   124 NRPKSDLQVKIGNAVFVEDTL------KILDSFVQEIEHHY--HAEIFPSHFKNPAEAEKQINDF 180

  Fly  1813 VRRRT----NLLVK---RHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCSHGSTTD------R 1864
            |..:|    ..|||   ..|...|:.::..|:.|.| |.::...:..|......:|.:      .
 Frog   181 VNNKTEGRIQELVKDLSEATKLVVINFILFNAEWQN-PFSSFFTHSRQFSVDENTTVEVQMMSKT 244

  Fly  1865 DGEMFFQVHPTVRQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSIS 1929
            |...|::                          :..:..:|:.. ..:|..|.:.::|       
 Frog   245 DLYQFYK--------------------------DEKIPCSVLQL-PYKNNASMLIIVP------- 275

  Fly  1930 PMDNLDRLERSL-VETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLF 1993
            .:..:..:|.:| |||.    :.|    ||..::...|:.||:||..|.:.....|..||: |:.
 Frog   276 ELGKIHEVEEALSVETL----KRW----TSSAEKSFFELFLPKFSISSSLKLKDILTDMGM-GII 331

  Fly  1994 KSDFADLRGLTGAGNRDIFLSDMI 2017
            .:|.||..|:  :.|..:.||.::
 Frog   332 FTDAADFSGI--SENSRLKLSKVV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 MDN1 956..>1505 CDD:444083
Serpin 1687..2136 CDD:459662 76/349 (22%)
serpina3NP_001011275.1 serpinA 43..411 CDD:381073 76/349 (22%)
Blue background indicates that the domain is not in the aligned region.

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