DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Spn43Ab

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001027395.1 Gene:Spn43Ab / 45040 FlyBaseID:FBgn0024293 Length:393 Species:Drosophila melanogaster


Alignment Length:384 Identity:90/384 - (23%)
Similarity:159/384 - (41%) Gaps:104/384 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly  1641 LINLMASSTQSTRPPVKLDPSPESSQGLEASTAMMDEDLQSFARLCNELAFSYWRAITSEKISSA 1705
            |:.|:|:.:||            .:.|.:|:.   |.:|         ||...:.|:.::.::  
  Fly     8 LLLLLATVSQS------------KTVGYDAAA---DRNL---------LAADLYNAVAADHLN-- 46

  Fly  1706 RSLVISPFALTSMLSMVFLGARGSTSGEMNEILKLD----DMVTFNPHLIFKNITNSVEQASDSD 1766
            .::||||..:.|.:::.|:||:|.|:.|:.:.|:|.    |.|:        ..:.|.:||...|
  Fly    47 ENVVISPATIQSSMALAFVGAKGQTASELQQGLRLGPGDADAVS--------QRSGSYQQALTRD 103

  Fly  1767 ----IATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRT----NLLVKR 1823
                :|...::.|      |.:....|::..|:.:..::::::||   ....:||    |..|..
  Fly   104 NNFRLANNIYINE------NLEFKGSFRDVAQRQFDSNIDKLDFH---PPYNKRTADGINRAVAT 159

  Fly  1824 HTMGKVLEYL-------RTNSVWVNGPLATISA---NLFQTDCSHGSTTDRDGEMFFQVHPTVRQ 1878
            .|.||:.:.|       ||..|.|||  .:.||   ..|:.|.:. ..:.|.|           .
  Fly   160 KTNGKITDILRAELLNDRTEGVIVNG--VSYSAAWQKAFRLDKTE-KRSFRTG-----------S 210

  Fly  1879 RRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISPMDNLDRLERSLVE 1943
            .:.|.:..:.....|......||||.||.........|.:.::|..:      |.|..|::||  
  Fly   211 GQSVKVDTMWTLQNFNYAEVNSLDAKVVELPYQNPDFSMLLLLPNRK------DGLRSLQQSL-- 267

  Fly  1944 TAFSDKQAWRRLLTSL--MDRPGMEVQLPRFSHRSFVNASLGLQ----KMGLRGLFKSD 1996
                   :.:.||..:  |.:..:||.||:||    |...|||:    |:|:..:|..|
  Fly   268 -------SGKNLLAEIGAMSQQKVEVLLPKFS----VTFGLGLEGPFKKLGVHTMFSRD 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 81/338 (24%)
Spn43AbNP_001027395.1 SERPIN 30..387 CDD:238101 82/347 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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