DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43366 and Spn47C

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001163116.1 Gene:Spn47C / 36163 FlyBaseID:FBgn0033574 Length:382 Species:Drosophila melanogaster


Alignment Length:486 Identity:101/486 - (20%)
Similarity:178/486 - (36%) Gaps:157/486 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1682 FARLCNELAFSYWRAITSEKISSARSLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTF 1746
            |||       :.:||:..|  ....::::||....|.:::||:||.|.::.|:...|.|      
  Fly    18 FAR-------NLFRALNDE--VPPVNMMVSPAGARSAMTLVFMGAGGKSADELRSKLIL------ 67

  Fly  1747 NPHLIFKNITNSVEQA-----SDSD------------IATAAFVREIFSDRANGKILPFFKEKTQ 1794
                   .::|..|.|     |.:|            :.|..:|.|      ..||...|.:...
  Fly    68 -------GVSNKSEVAKQHAESWTDECSCAKKGVALRLVTRLYVNE------EEKIRTDFNDMAL 119

  Fly  1795 QLYAGHVEEVNFHVVNDIVRRRTNLLVKRHTMGKVLEYLRTNSVWVNGPLATISAN--------- 1850
            :.:......:|:....|.| ::.|..:::||...| ..|.|..|: |...:.|..|         
  Fly   120 EFFNAEAYSLNYLNPEDSV-KKVNKWLEKHTFYTV-RNLFTPEVF-NSDSSVILVNSLFFRAKWN 181

  Fly  1851 ------LFQTDCSHGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYRSG-FLAGYEPSLDATVVSF 1908
                  |.|.|             .|.::|  |||..|   :::.:.| |..|....|.:.::..
  Fly   182 KIFPQQLTQID-------------DFWINP--RQRMEV---SMMRQIGQFRYGESKKLKSQILQL 228

  Fly  1909 GRVQNTVSTVYVMPGHQSSISPMDNLDRLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFS 1973
            ...::.::.:.::|      :.:|.|..||..|.:...::..|     .|||..  ::|.:|:|.
  Fly   229 PFERSNLTMMIILP------TAIDGLPELEEKLGQLDMNEVAA-----KSLMKE--VDVTIPKFR 280

  Fly  1974 HRSFVNASLGLQKMGLRGLFKSDFADLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEM 2038
            ....|:..:.|||||:..:|.:..||             |||:.::.|     .:||||..|...
  Fly   281 IECTVDLKVPLQKMGINSVFDAGQAD-------------LSDLFEMKT-----PQKISEARHKVF 327

  Fly  2039 YPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQAR 2103
            .                        .|.:||..|...|        .:.|:.|:          :
  Fly   328 L------------------------NVTEFGCEVAPEA--------EVQPEVLK----------K 350

  Fly  2104 VPDAPRLRFDKPFLYFVRHNPTGMILFMGRF 2134
            .||....:.|:||::.:|....  :.|:|.|
  Fly   351 NPDRKFFKADRPFVFAIRDRKN--VYFVGHF 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 98/481 (20%)
Spn47CNP_001163116.1 SERPIN 18..379 CDD:238101 100/484 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.