DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Spn28Dc

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_609172.1 Gene:Spn28Dc / 34091 FlyBaseID:FBgn0031973 Length:536 Species:Drosophila melanogaster


Alignment Length:629 Identity:121/629 - (19%)
Similarity:208/629 - (33%) Gaps:215/629 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1600 DMQPPKVLPY-NANKADPVQLQ-------------VPIHSQSMLNQQRPSQRPPLLINLMASSTQ 1650
            |::.|:.:.| |.......|:|             ||:.|..::| ...:|..|.|..:..:|.:
  Fly    24 DLRTPETMAYINGLMQRRHQMQQEAQQHIQAIPPAVPLQSPGLVN-GLGNQNDPALNRISGTSVK 87

  Fly  1651 STRPPVKLDPSPESSQGLEASTAMMDEDLQSFARLCNE-LAFSYWRAITSEKISSARSLVISPFA 1714
            .:..|...      |.|.        .||.:..|:.|. |.|:   .|..:.:::.::.:.||.:
  Fly    88 PSNLPAAY------SNGY--------VDLATSDRIANSVLNFA---NILGQHLANGKTQIYSPLS 135

  Fly  1715 LTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSVEQASDSDI----------AT 1769
            :...|:::.|||:|.:..|::.:..:.|  |...|..|..:...::|.:...|          |:
  Fly   136 IVHSLALLLLGAKGRSYEELSTVFDIPD--TSRLHEQFGLMLQDLQQPTREAISAGRPLTDWRAS 198

  Fly  1770 AAFVREIFSDR--------ANG-------KILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRTNL 1819
            :|......:.|        |||       .:.|.::....::||..::..:|.......|...|.
  Fly   199 SAMRSNRRAQRPGAHEVHLANGLFTQTGYTLNPDYRRVIVEVYASDLQIQDFEGSPATARYNINA 263

  Fly  1820 LVKRHTMGKVLEYLRTNSVWVNGPLAT--ISAN------LFQTDCSHGSTTDRDGEMFFQVHPTV 1876
            .|.:||...:     .|.:..:.|..|  |.||      .::||....:|.              
  Fly   264 YVAQHTKNHI-----ENIIASDIPQTTRMILANALYFKAFWETDFIESATR-------------- 309

  Fly  1877 RQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRV------------------QNTVSTVYVMPG 1923
                    |...|.:|  .|.||.:...:::.|..                  :..:||:|::..
  Fly   310 --------PDNFYPNG--EGTEPVMRVQMMATGGAYPYHEDHELGCKIIGLPYRGNLSTMYIIQP 364

  Fly  1924 HQSSISPMDNLD-RLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKM 1987
            .:||:..:..|. ||....:|:           :.|.|.|....|..|:......||....:|:|
  Fly   365 FKSSVRELMALQKRLTADKIES-----------MISRMYRRAALVAFPKMHLTESVNLKTVMQRM 418

  Fly  1988 GLRGLFKSDFADL--------------------------RGLTGAGNRDIFLSDMIQINTFSTCG 2026
            ||.|:|.:...||                          |..||....|:.:.|::....| |..
  Fly   419 GLGGIFSAVQNDLSLIATNEATRTNALGGNSLQNLEAQRRAGTGGARSDLVVDDIVHKVDF-TVN 482

  Fly  2027 EEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQESALGRGFYDDLLDPKYL 2091
            |:..........|    |:|...||                         |.||           
  Fly   483 EQGTEAAASSVTY----LKKSGPDV-------------------------LFRG----------- 507

  Fly  2092 ELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNPTGMILFMGRFN 2135
                                 |.||:..|||:||.::||.|..|
  Fly   508 ---------------------DTPFMVLVRHDPTKLVLFYGLIN 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 101/528 (19%)
Spn28DcNP_609172.1 SERPIN 111..527 CDD:238101 98/522 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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