DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Spn28B

DIOPT Version :10

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_609128.2 Gene:Spn28B / 34035 FlyBaseID:FBgn0083141 Length:378 Species:Drosophila melanogaster


Alignment Length:467 Identity:90/467 - (19%)
Similarity:170/467 - (36%) Gaps:132/467 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly  1693 YWRAITSEKISSARSLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITN 1757
            ::|.:.|:  ::.|:|:.||.:...::|||::.:.|.|..|:..:||..:    |..|:..|..:
  Fly    21 FYRILASQ--NAKRNLIYSPISAEIIMSMVYMASGGKTFEELRNVLKFSE----NKTLVANNYRS 79

  Fly  1758 SVEQASDSDIATAAFVREIF-----SDR--ANGK--ILPFFKEKTQQLYAGHVEEVNFH------ 1807
            .:     ||:..    ||.|     ::|  .|.|  ::|.|.:..::.:....:.:...      
  Fly    80 LL-----SDLKR----RETFIILHMANRIYVNKKYCLVPEFNQLARKAFKAKAKSIRLDDPVSAS 135

  Fly  1808 -VVNDIVRRRTNLLVKRHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCSHGSTTDRDGEMFFQ 1871
             :||..:..||..:::...:.|  ::....|.::      ::|..|:....:....|       |
  Fly   136 AIVNSWILNRTRGMIRNIVLPK--DFNSDTSAFL------VNAIYFKGQWLYNFKAD-------Q 185

  Fly  1872 VHPT---VRQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISPMDN 1933
            .|..   |....::|:..:...:..|:||...:||.::......:|:|...::|         ::
  Fly   186 THIADFYVSANEIIPVKMMTLSASLLSGYIDDIDAKIIELPYWNSTLSMRIILP---------NS 241

  Fly  1934 LDRLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFA 1998
            :|.|.:...:..|.|..         :::..:.|:||:|...|........:.:|:..:||.. |
  Fly   242 VDGLRKLKEKVGFIDYH---------LEKKSVNVKLPKFKIESKAQLKGIFENLGILDVFKPS-A 296

  Fly  1999 DLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSE 2063
            ||.||.......|   |.|....|.     ||.|...........|.:|.|.:|           
  Fly   297 DLNGLVLESGAKI---DKIVQKAFL-----KIDEKGGEASAATGVLTRRKKSID----------- 342

  Fly  2064 RVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQARVPDAPRLRF--DKPFLYFVRHNPTG 2126
                  :|:|                                  |.:.|  |.||.|.:..|.  
  Fly   343 ------NLIQ----------------------------------PPMEFIADHPFFYVIHDNK-- 365

  Fly  2127 MILFMGRF-NPR 2137
            :|.|.|.. .||
  Fly   366 VIYFQGHIVEPR 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 MDN1 956..>1505 CDD:444083
Serpin 1687..2136 CDD:459662 88/464 (19%)
Spn28BNP_609128.2 serpin42Dd-like_insects 12..376 CDD:381070 88/464 (19%)
Blue background indicates that the domain is not in the aligned region.

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