DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43366 and Serpinb1b

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:XP_038952280.1 Gene:Serpinb1b / 306891 RGDID:1560658 Length:380 Species:Rattus norvegicus


Alignment Length:466 Identity:110/466 - (23%)
Similarity:187/466 - (40%) Gaps:123/466 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1700 EKISSARSL-----------------VISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFN 1747
            |::|||.||                 :.|||:::|.|:||||||:||::...   |:|.:...|:
  Rat     2 EQLSSANSLFALELFHTLSESSPTGNIFSPFSISSALAMVFLGAKGSSAPSS---LRLAETFHFD 63

  Fly  1748 P----HLIFKNITNSVEQASDSDIATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFHV 1808
            .    |..|:::...:.:...|.  |......::.::.. ..||.|...||::|...:..|:|..
  Rat    64 SVEDIHSRFQSLNAEMRKHGASH--TLKVANRLYGEKTY-NFLPEFLASTQKMYGADLAPVDFQH 125

  Fly  1809 VNDIVRRRTNLLVKRHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCSHGSTTDRDG---EMFF 1870
            .::..|:..|..||..|.||:.|.|....|.....|..::|..|:            |   |.|.
  Rat   126 ASEDARKEINKWVKGQTEGKIPELLAGGVVNSTTKLVLVNAIYFK------------GIWQEKFL 178

  Fly  1871 QVHPTVRQRRL----VPIPAVLY-RSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISP 1930
            ..|.|....||    ..:..::| :..|..||.|.|...|:........:|.|.::|  :.....
  Rat   179 TRHTTDAPFRLNKKDTKMVKMMYQKEKFPFGYIPDLKCKVLEMPYQGGELSMVILLP--EDIEDE 241

  Fly  1931 MDNLDRLERSL-VETAFSDKQAWRRLLTSLMDRPGMEVQLPRFS-HRSFV-NASLGLQKMGLRGL 1992
            ...|.::|..| :|..:.    |.:  ...:....:.|.||:|. ..|:: |::||  ::||:.|
  Rat   242 STGLQKIEEQLTLEKLYE----WTK--HENLKEIDVHVNLPKFKIEESYILNSNLG--RLGLQDL 298

  Fly  1993 FKSDFADLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDD 2057
            |.|..|||.|:  :.:||||:|.::                           .|...:|:....:
  Rat   299 FSSSKADLSGM--SESRDIFISKIV---------------------------HKSFVEVNEEGTE 334

  Fly  2058 AFDSSERVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQARVPDAPRLRFDKPFLYFVRH 2122
            |..::..:|::..:..|:.:                                  .|.|||:|:||
  Rat   335 AAAATAGLVEYCLVSIEAFI----------------------------------VDHPFLFFIRH 365

  Fly  2123 NPTGMILFMGR 2133
            |||..:||.||
  Rat   366 NPTANMLFFGR 376

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 110/466 (24%)
Serpinb1bXP_038952280.1 serpinB1_LEI 1..380 CDD:381028 110/466 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.