DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Serpina3m

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001257911.1 Gene:Serpina3m / 299276 RGDID:735068 Length:419 Species:Rattus norvegicus


Alignment Length:468 Identity:112/468 - (23%)
Similarity:193/468 - (41%) Gaps:123/468 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1688 ELAFSYWRAITSEKISSARSLVISPFALTSMLSMVFLGARGSTSGEMNEILK--LDDMVTFNPHL 1750
            :.|||.::.:..:  :..:::|.||.::::.|::|.|||:|:|..|:.|:|:  |.:....:.|.
  Rat    53 DFAFSLYKMLALK--NPDKNVVFSPLSISAALAIVSLGAKGNTLEEILEVLRFNLTESYETDIHQ 115

  Fly  1751 IFKNITNSVEQASDS-DIATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFH------- 1807
            .|.::...:.|..|. .|.|.   ..:|.|: |.::|..|:|||:.||.......:|.       
  Rat   116 GFGHLLQRLSQPGDQVKIITG---NALFIDK-NLQVLAEFQEKTRALYQVEAFTADFQQPRVTEK 176

  Fly  1808 VVNDIVRRRTNLLVKRHTMGKVLEYL-----RTNSVWVNGPLATISANLFQTDCSHGSTTDRDGE 1867
            ::||.||.:        |.||:.|.:     ||:.|.||       ..||:....    ...|.:
  Rat   177 LINDYVRNQ--------TQGKIQELVSGLKERTSMVLVN-------YLLFRGKWK----VPFDPD 222

  Fly  1868 MFFQVHPTVRQRRLVPIPAVLYRSGFLAGY--EPSLDATVVSFGRVQNTVSTVYVMPGHQSSISP 1930
            ..|:....|.::|.|.: :::........|  :..|..:|:......|: |.::::|       .
  Rat   223 YTFESEFYVDEKRSVKV-SMMKIEELTTPYFRDEELSCSVLELKYTGNS-SALFILP-------D 278

  Fly  1931 MDNLDRLERSL-VETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFK 1994
            ...:.::|.|| .||.    :.|:   .||..|...|:.|||.|..:..:....|.::|:|.:| 
  Rat   279 KGRMQQVEASLQPETL----KKWK---DSLRPRKIDELYLPRLSISTDYSLEEVLPELGIRDVF- 335

  Fly  1995 SDFADLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDDAF 2059
            |..|||..:|||  :|:.:|.::                |.|.:           ||:.|..:| 
  Rat   336 SQQADLSRITGA--KDLSVSQVV----------------HKVVL-----------DVNETGTEA- 370

  Fly  2060 DSSERVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNP 2124
                          .:|.|..                |.||..|.|..  :.|::|||..|.|..
  Rat   371 --------------AAATGAN----------------LVPRSGRPPMI--VWFNRPFLIAVSHTH 403

  Fly  2125 TGMILFMGR-FNP 2136
            ...||||.: .||
  Rat   404 GQTILFMAKVINP 416

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 110/466 (24%)
Serpina3mNP_001257911.1 SERPIN 56..416 CDD:214513 109/463 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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