DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and srp-8

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001309497.1 Gene:srp-8 / 191960 WormBaseID:WBGene00005649 Length:372 Species:Caenorhabditis elegans


Alignment Length:461 Identity:86/461 - (18%)
Similarity:156/461 - (33%) Gaps:150/461 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly  1705 ARSLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSVEQASDSDIAT 1769
            ::|.|.||.|::..|..::..|||.|..::::.|             |||.|:.......|:::|
 Worm    29 SQSFVFSPIAISLALYSLYEAARGETRSQIHDCL-------------FKNATDGEMVTHFSNVST 80

  Fly  1770 AAFVREIFSDRANGKILPFFKE----------------KTQQLYAGHVE-----EVNFHVVNDIV 1813
            |               |...|:                ||:.|....|:     ||:.|.:::  
 Worm    81 A---------------LSAMKKDPQVKICNHIICRNGIKTESLCLDKVKLLYNCEVSSHDLDN-- 128

  Fly  1814 RRRT----NLLVKRHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCS---HGSTTDRDGEMFFQ 1871
            .:.|    |.|::.:|.|.:.:.....|:..:..:..:||..|:....   |..:|.:  :.|| 
 Worm   129 EKETIKTINKLIRENTDGHIKKINTKISIDKDQVVVFLSAACFEAQWQNKFHKLSTSK--KEFF- 190

  Fly  1872 VHPTVRQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISPMDNLDR 1936
              .|....|.:..   |:.:|....|..:....|:|.....::......:|..|..::  :.|..
 Worm   191 --CTANSHRNIKF---LHATGANRKYCENDKFQVLSLPYTDSSFEMTIFLPKEQFGLA--EALKT 248

  Fly  1937 LERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFADLR 2001
            |..|.::.           |.|.:....:.||:|.:.:.:.::.:..||.:|:..:         
 Worm   249 LGTSTIQE-----------LKSNVSNYLVNVQIPIWRNETEIDLNSTLQAIGITKI--------- 293

  Fly  2002 GLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHH---VEMYPAPPLRKRNKDVDATDDDAFDSSE 2063
                       |::...|..|:.  ...|||..|   :|:       ..|....||:........
 Worm   294 -----------LNESAYIGNFAE--NVHISEFIHKAIIEV-------NENGTSPATNTKVITKRW 338

  Fly  2064 RVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNPTGMI 2128
            |        :|:...|.|.                             .|.||||.:.:.  ..|
 Worm   339 R--------EETGEIRDFI-----------------------------ADHPFLYTIHYK--NSI 364

  Fly  2129 LFMGRF 2134
            ||||.|
 Worm   365 LFMGVF 370

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 86/461 (19%)
srp-8NP_001309497.1 serpinL_nematode 14..370 CDD:381047 85/459 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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