DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Serpina12

DIOPT Version :10

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_620180.2 Gene:Serpina12 / 191570 RGDID:708485 Length:414 Species:Rattus norvegicus


Alignment Length:477 Identity:95/477 - (19%)
Similarity:179/477 - (37%) Gaps:125/477 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1677 EDLQSFARLCNELAFSYWRAITSEKISSARSLVISPFALTSMLSMVFLGARGSTSGEMNEILKLD 1741
            :|.:...|...|..|...:.:.|.  |...::.:||.::::..||:.|||:.||..|:.|.....
  Rat    43 KDARELTRHNMEFGFKLLQRLASN--SRQGNIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFK 105

  Fly  1742 DMVTFNPHLIFKNITNSVEQASDS---DIATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEE 1803
            :|...:.|:.|..:...:.:.:..   .|..|.|:.:....:..      |.:..:.||...:..
  Rat   106 EMSDRDMHMGFHYLLQKLNRETQDVKMSIGNALFMDQRLRPQQR------FLKLAKNLYDADMIL 164

  Fly  1804 VNFH-------VVNDIVRRRTN----LLVKRHTMGKVLEYLRTNSVWVNGPLATISANLFQTDCS 1857
            .||.       .:|..:.|:|:    .:||....|.|:  |.||.::..|        .:|.:..
  Rat   165 TNFQDLENTQKNINKYISRKTHNRIENMVKNIDPGTVM--LLTNYIYFQG--------RWQYEFD 219

  Fly  1858 HGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMP 1922
            ...|.:.|   ||     :.:.:.|.:|.:..|..:...|:..|..|::.....:|..:| :|:|
  Rat   220 PKQTKEED---FF-----IEEGKTVKVPMMFQRGMYDMAYDSQLSCTILEMPYRRNITAT-FVLP 275

  Fly  1923 GHQSSISPMDNLDRLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKM 1987
                   ....|..||:.|....|:   .|:    ||:.:..::|.:||....:..|....|.::
  Rat   276 -------DSGKLRLLEQGLQADIFA---KWK----SLLSKRVVDVWVPRLHISATYNMKKVLSRL 326

  Fly  1988 GLRGLFKSDFADLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVD 2052
            |:..:|: :..||                           .:||.|..:::              
  Rat   327 GISKIFE-EHGDL---------------------------TRISSHRSLKV-------------- 349

  Fly  2053 ATDDDAFDSSE-RVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLR-PRQARVPDAPRLRFDKP 2115
               .:|...:| |:.:.|:   |.|.|.|           ...||:. ||        |::.:.|
  Rat   350 ---GEAVHKAELRMNEKGT---EGAAGSG-----------AQTLPMETPR--------RMKLNAP 389

  Fly  2116 FLYFVRHNPTGMILFMGR-FNP 2136
            ||..:..|....::|:.| :||
  Rat   390 FLMMIYENLMPSMIFLARIYNP 411

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 MDN1 956..>1505 CDD:444083
Serpin 1687..2136 CDD:459662 91/465 (20%)
Serpina12NP_620180.2 serpinA12_vaspin 40..411 CDD:381026 93/475 (20%)
Reactive center loop. /evidence=ECO:0000250|UniProtKB:Q8IW75 364..382 7/31 (23%)
Blue background indicates that the domain is not in the aligned region.

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