DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and srp-6

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_504890.1 Gene:srp-6 / 179125 WormBaseID:WBGene00005647 Length:375 Species:Caenorhabditis elegans


Alignment Length:336 Identity:65/336 - (19%)
Similarity:127/336 - (37%) Gaps:59/336 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1707 SLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSV---EQASDSDIA 1768
            |.|.||.::...||:|.:.|:|.|..|:.:.| |:..........|.||:..:   |:.::.::|
 Worm    33 SFVFSPLSIALALSLVHVAAKGETRDEIRKAL-LNGATDEELEQHFSNISAGLLVAEKGTEVNVA 96

  Fly  1769 TAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRTNLLVKRHTMGKVLEYL 1833
            ...|.|:.|:      |...:....::||.....::||. ..:......|..|..:|.|.:.:.:
 Worm    97 NHIFSRKTFT------IKKLYLNDVKKLYNAGASQLNFE-DQEASAEAINNFVSENTKGHIKKII 154

  Fly  1834 RTNSVWVNGPLATISANLF------QTDCSHGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYRSG 1892
            ..:|  ::..|..:..|.|      ||.....||..|:   ||....:.|:...      |:...
 Worm   155 NPDS--ISEELVAVLTNAFYFKANWQTKFKKESTYKRE---FFSSENSKRETEF------LHSRN 208

  Fly  1893 FLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSIS-PMDNLDRLERSLVETAFSDKQAWRRLL 1956
            ....|..:....|:|......:.:....:|..:..:| .:.|||.:                 .:
 Worm   209 SNRKYSENGQFQVLSLPYKDTSFALSIFLPKTRFGLSEALQNLDSV-----------------TI 256

  Fly  1957 TSLMDRPG---MEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFADLRGLTGAGNRDIFLSD--- 2015
            ..||....   :.:.:|::...:.:..:..|..:|:...| :|.|||......    |::|.   
 Worm   257 QQLMSNTSNTLVNIAMPKWKIETALGLNRALMAVGIEKAF-TDSADLSNFADG----IYISQAAH 316

  Fly  2016 --MIQINTFST 2024
              :|:::...|
 Worm   317 KALIEVDEDGT 327

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 65/336 (19%)
srp-6NP_504890.1 serpinL_nematode 16..374 CDD:381047 65/336 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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