DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and srp-2

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_503318.1 Gene:srp-2 / 178586 WormBaseID:WBGene00005643 Length:359 Species:Caenorhabditis elegans


Alignment Length:329 Identity:73/329 - (22%)
Similarity:137/329 - (41%) Gaps:69/329 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly  1707 SLVISPFALTSMLSMVFLGARGSTSGEMNEILKLDDMVTFNPHLIFKNITNSVEQASDSD----- 1766
            |:|:||.:::..|:::..||.|||..|:.::|        ....||:..:..:|...|:|     
 Worm    24 SVVLSPLSISLGLALIHAGACGSTQKELEDVL--------GGSRIFEEFSGLMEAVGDTDNGVET 80

  Fly  1767 -IATAAFVREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFHVVNDIVRRRTNLLVKRHTMGKVL 1830
             |....||.:.::      |...:.|..::||....|.::|..... ..:..|..|:.||.||:.
 Worm    81 KIVNRVFVNQAYT------IHQDYLETVEKLYKASGESLDFSQTEQ-AAKTMNTFVENHTNGKIK 138

  Fly  1831 EYLRTNSVWVNGPLA-TISANLFQTD----CSHGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYR 1890
            :.:..:|  .|...| .::|..|:.|    .:..|||.|:   ||......||     ||     
 Worm   139 DLIPADS--ANNAFAFLVNAMYFKADWQSKFAKESTTGRE---FFTSEAESRQ-----IP----- 188

  Fly  1891 SGFLAGYEPSLDAT------VVSFGRVQNTVSTVYVMPGHQSSISPMDNLDRLERSLVETAFSD- 1948
              ||...:...|.|      |:|........:....:|..:..:  :|.|:::....::...:| 
 Worm   189 --FLTELDEHRDYTEDVLFQVLSLKYADPKFTLAIFLPKQRFGL--VDALEKINGEYIQNLLNDL 249

  Fly  1949 KQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFADLRGLTGAGNRDIFL 2013
            |.::            :.||:|:|.....::....|:.:|::.:| ::.|||.|:..    .:|:
 Worm   250 KSSY------------VSVQIPKFKIEKELDLKETLEAIGIKEIF-AEGADLSGIAD----KVFI 297

  Fly  2014 SDMI 2017
            |..|
 Worm   298 SSGI 301

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 73/329 (22%)
srp-2NP_503318.1 serpinL_nematode 7..358 CDD:381047 73/329 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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