DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Serpind1

DIOPT Version :9

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:NP_001317976.1 Gene:Serpind1 / 15160 MGIID:96051 Length:478 Species:Mus musculus


Alignment Length:496 Identity:97/496 - (19%)
Similarity:184/496 - (37%) Gaps:128/496 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly  1663 ESSQGLEASTAMMDEDLQSFARLCNELAFSYWRAITSEKISSARSLVISPFALTSMLSMVFLGAR 1727
            |||.|...........:|....|..:.||:.:| :..::.:::.:|.|:|..:::.:.|:.||.|
Mouse    86 ESSAGNILQLFQGKSRIQRLNILNAKFAFNLYR-VLKDQATTSDNLFIAPVGISTAMGMISLGLR 149

  Fly  1728 GSTSGEMNEILKLDDMVTFNP-------HLIFKNITNSVEQAS---DSDIATAAFVREIFSDRAN 1782
            |.|..|::.:|...|.|..:.       |.:|:.:|:.:.:.:   ........::::.|..|.:
Mouse   150 GETHEEVHSVLHFRDFVNASSKYEVTTIHNLFRKLTHRLFRRNFGYTLRSVNGLYIQKQFPIRED 214

  Fly  1783 GKILPFFKEKTQQLYAGHVEEVNF------HVVNDIVRRRTNLLVKR--HTMGKVLEYLRTNSVW 1839
                  ||...::.|....:|.||      ...|:.:.:.|..|:|.  ..:....:.|..|.::
Mouse   215 ------FKAAMREFYFAEAQEANFPDPAFISKANNHILKLTKGLIKEALENIDPATQMLILNCIY 273

  Fly  1840 VNGPLATISANLFQTDCSHGSTTDRDGEMFFQVHPTVRQRRLVPIPAVLYRSGFLAGYEPSLDAT 1904
            ..|..    .|.|..:.:|...        |:::    :|.:|.:..:..:..|||..:..||..
Mouse   274 FKGTW----VNKFPVEMTHNHN--------FRLN----EREVVKVSMMQTKGNFLAANDQELDCD 322

  Fly  1905 VVSFGRVQNTVSTVYVMPGHQSSISPMDNLD-RLERSLVETAFSDKQAWRRLLTSLMDRPGMEVQ 1968
            ::....| ..:|.:.|:|   ..:|.|..|: :|...:||       .|::.:|:..    .||.
Mouse   323 ILQLEYV-GGISMLIVVP---RKLSGMKTLEAQLTPQVVE-------RWQKSMTNRT----REVL 372

  Fly  1969 LPRFSHRSFVNASLGLQKMGLRGLFKSDFADLRGLTGAGNRDIFLSDMIQINTFSTCGEEKISEH 2033
            ||:|......|....|:.||:..||..:          ||........|.|:.|           
Mouse   373 LPKFKLEKNYNLVEVLKSMGITKLFNKN----------GNMSGISDQRIAIDLF----------- 416

  Fly  2034 HHVEMYPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQESALGRGFYDDLLDPKYLELPLPLR 2098
                        |....:...::....::...|.|                              
Mouse   417 ------------KHQSTITVNEEGTQAAAVTTVGF------------------------------ 439

  Fly  2099 PRQARVPDAPRLRF--DKPFLYFVRHNPTGMILFMGRF-NP 2136
                 :|.:.::||  |:|||:.|..:.|..:||||:. ||
Mouse   440 -----MPLSTQVRFTVDRPFLFLVYEHRTSCLLFMGKVTNP 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 SERPIN 1687..2136 CDD:294093 89/470 (19%)
Serpind1NP_001317976.1 HCII 43..476 CDD:239002 97/496 (20%)
2 X 11 AA approximate repeats, Asp/Glu-rich (acidic) (hirudin-like) 54..78
Glycosaminoglycan-binding site. /evidence=ECO:0000250 171..191 3/19 (16%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11461
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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