DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43366 and Serpina3a

DIOPT Version :10

Sequence 1:NP_610188.2 Gene:CG43366 / 35519 FlyBaseID:FBgn0263109 Length:2140 Species:Drosophila melanogaster
Sequence 2:XP_006240581.2 Gene:Serpina3a / 100909605 RGDID:6502633 Length:410 Species:Rattus norvegicus


Alignment Length:528 Identity:102/528 - (19%)
Similarity:194/528 - (36%) Gaps:175/528 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly  1654 PPVKLDPSPESSQGLEASTAMMDEDLQSFARLCN-ELAFSYWRAITSEKISSARSLVISPFALTS 1717
            |..||.......:|.:....:....|.|    || :.|||.::.:..:  :..:::|.|.|::::
  Rat    12 PDGKLGRDTAVQKGQDNKIQVDSSTLSS----CNTDFAFSLYKELVLK--NPDKNIVFSSFSIST 70

  Fly  1718 MLSMVFLGARGSTSGEMNEILKLDDMVTFNP---------HLIFK-NITNSVEQASDSDIATAAF 1772
            .|.::.|||:.:|..|:.|.||.:  :|..|         ||:.: |:.....|.|   ..:|.|
  Rat    71 ALVLLSLGAKNNTLKEILEGLKFN--LTETPEAEIHQGYEHLLQRLNLPGDQVQIS---TGSALF 130

  Fly  1773 VREIFSDRANGKILPFFKEKTQQLYAGHVEEVNFH-------VVNDIVRRRTNLLVKR--HTMGK 1828
            :::      :.:||..|:||.:.||.......:|.       ::||.||::|...:|.  ..:.|
  Rat   131 IKK------HLQILAEFQEKARALYQAEAFSTDFQQPHEAKKLINDYVRKQTQGKIKELISVLDK 189

  Fly  1829 VLEYLRTNSVWVNGPLATISANLFQTDCSHGSTTDRDGEMFFQVHPTVR------QRRLVPIPAV 1887
            ....:..|.::..|                      ..:|.|..|.|.:      :::.|.:|.:
  Rat   190 KTSMVLVNYIYFKG----------------------KWKMPFDPHDTFQSEFYLDEKKSVKVPMM 232

  Fly  1888 --------LYRSGFLAGYEPSLDATVVSFGRVQNTVSTVYVMPGHQSSISPMDNLDRLERSLVET 1944
                    .:|       :..|..:|:.. :.....|.::::|       ....:.::|.||   
  Rat   233 KIEKLTTPYFR-------DEELSCSVLEL-KYTGNASALFILP-------DQGRMQQVEASL--- 279

  Fly  1945 AFSDKQAWRRLLTSLMDRPGMEVQLPRFSHRSFVNASLGLQKMGLRGLFKSDFADLRGLTGAGNR 2009
               ..:..||...:|..|...|:::|:||..:.:.....|.::|:|.:| |..|||..:|||  :
  Rat   280 ---QPETLRRWKDTLRPRRIDELRMPKFSISTDMRLGDILPELGIREVF-SQQADLSRITGA--K 338

  Fly  2010 DIFLSDMIQINTFSTCGEEKISEHHHVEMYPAPPLRKRNKDVDATDDDAFDSSERVVDFGSLVQE 2074
            |:.:|.::.                                            :.|:|......|
  Rat   339 DLSVSQVVH--------------------------------------------KAVLDVTETGTE 359

  Fly  2075 SALGRG---------FYDDLLDPKYLELPLPLRPRQARVPDAPRLRFDKPFLYFVRHNPTGMILF 2130
            :|...|         ||       |:                 .:.|::|||..:....|.:.||
  Rat   360 AAAATGVKIIPMCAKFY-------YV-----------------TMYFNRPFLMIISDTNTHIALF 400

  Fly  2131 MGRF-NPR 2137
            |.:. ||:
  Rat   401 MAKVTNPK 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43366NP_610188.2 MDN1 956..>1505 CDD:444083
Serpin 1687..2136 CDD:459662 93/492 (19%)
Serpina3aXP_006240581.2 serpinA3_A1AC 27..408 CDD:381019 97/511 (19%)
Blue background indicates that the domain is not in the aligned region.

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