DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or94b

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524456.1 Gene:Or94b / 42712 FlyBaseID:FBgn0039034 Length:383 Species:Drosophila melanogaster


Alignment Length:393 Identity:78/393 - (19%)
Similarity:162/393 - (41%) Gaps:61/393 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QKRSRDGCI-YLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSP 77
            :....||.: :|.|...|:..||          ||:|.:..:|                .::.:.
  Fly    26 ENEGEDGVLTWLKRIYPFVLHLP----------LTFTYIALMW----------------YEAITS 64

  Fly    78 GEFLTSLQVCINAYGSSVKVAITYSML---WRLIKAKNILDQL------DLRCTAMEEREKIHLV 133
            .:|..:.||   .|.|..::|:...:|   :|..:|.:::.:|      :||     ..|:|...
  Fly    65 SDFEEAGQV---LYMSITELALVTKLLNIWYRRHEAASLIHELQHDPAFNLR-----NSEEIKFW 121

  Fly   134 VARSNHAFLIFTFVYCG---YAGSTYLSSVLSG--RPPWQLYNPFIDWHDGTLKLWVASTLEYMV 193
            .....:...||.:...|   .|...|:|.....  ..|:..|.|| :|.... :.:.|.....:.
  Fly   122 QQNQRNFKRIFYWYIWGSLFVAVMGYISVFFQEDYELPFGYYVPF-EWRTRE-RYFYAWGYNVVA 184

  Fly   194 MSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDH---KLIL 255
            |:...|.:.|.|:....:...:.:...:|..|:..|:   |.:|.::..||.:....|   :.:.
  Fly   185 MTLCCLSNILLDTLGCYFMFHIASLFRLLGMRLEALK---NAAEEKARPELRRIFQLHTKVRRLT 246

  Fly   256 RYC-AIIKP-VIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCN 318
            |.| .::.| |:...:|:.|::  ....:.|:::.|.......:.:..||..:::|.|..||..|
  Fly   247 RECEVLVSPYVLSQVVFSAFII--CFSAYRLVHMGFKQRPGLFVTTVQFVAVMIVQIFLPCYYGN 309

  Fly   319 LIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSV 383
            .:.....:||:::|.:||::.|...:..|..:::.:::|:...||..|:|.:...:.....|:|.
  Fly   310 ELTFHANALTNSVFGTNWLEYSVGTRKLLNCYMEFLKRPVKVRAGVFFEIGLPIFVKTINNAYSF 374

  Fly   384 ITI 386
            ..:
  Fly   375 FAL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 65/323 (20%)
Or94bNP_524456.1 7tm_6 66..372 CDD:251636 65/320 (20%)

Return to query results.
Submit another query.