DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or94b

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524456.1 Gene:Or94b / 42712 FlyBaseID:FBgn0039034 Length:383 Species:Drosophila melanogaster


Alignment Length:393 Identity:78/393 - (19%)
Similarity:162/393 - (41%) Gaps:61/393 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 QKRSRDGCI-YLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSP 77
            :....||.: :|.|...|:..||          ||:|.:..:|                .::.:.
  Fly    26 ENEGEDGVLTWLKRIYPFVLHLP----------LTFTYIALMW----------------YEAITS 64

  Fly    78 GEFLTSLQVCINAYGSSVKVAITYSML---WRLIKAKNILDQL------DLRCTAMEEREKIHLV 133
            .:|..:.||   .|.|..::|:...:|   :|..:|.:::.:|      :||     ..|:|...
  Fly    65 SDFEEAGQV---LYMSITELALVTKLLNIWYRRHEAASLIHELQHDPAFNLR-----NSEEIKFW 121

  Fly   134 VARSNHAFLIFTFVYCG---YAGSTYLSSVLSG--RPPWQLYNPFIDWHDGTLKLWVASTLEYMV 193
            .....:...||.:...|   .|...|:|.....  ..|:..|.|| :|.... :.:.|.....:.
  Fly   122 QQNQRNFKRIFYWYIWGSLFVAVMGYISVFFQEDYELPFGYYVPF-EWRTRE-RYFYAWGYNVVA 184

  Fly   194 MSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDH---KLIL 255
            |:...|.:.|.|:....:...:.:...:|..|:..|:   |.:|.::..||.:....|   :.:.
  Fly   185 MTLCCLSNILLDTLGCYFMFHIASLFRLLGMRLEALK---NAAEEKARPELRRIFQLHTKVRRLT 246

  Fly   256 RYC-AIIKP-VIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCN 318
            |.| .::.| |:...:|:.|::  ....:.|:::.|.......:.:..||..:::|.|..||..|
  Fly   247 RECEVLVSPYVLSQVVFSAFII--CFSAYRLVHMGFKQRPGLFVTTVQFVAVMIVQIFLPCYYGN 309

  Fly   319 LIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSV 383
            .:.....:||:::|.:||::.|...:..|..:::.:::|:...||..|:|.:...:.....|:|.
  Fly   310 ELTFHANALTNSVFGTNWLEYSVGTRKLLNCYMEFLKRPVKVRAGVFFEIGLPIFVKTINNAYSF 374

  Fly   384 ITI 386
            ..:
  Fly   375 FAL 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 65/323 (20%)
Or94bNP_524456.1 7tm_6 66..372 CDD:251636 65/320 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45466084
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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