DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or94a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524455.1 Gene:Or94a / 42711 FlyBaseID:FBgn0039033 Length:387 Species:Drosophila melanogaster


Alignment Length:386 Identity:72/386 - (18%)
Similarity:161/386 - (41%) Gaps:55/386 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINAYGSS 94
            |.|::......|.::.:|:|.:..:|..     .|:.|.:.|     .|:.|         |.|.
  Fly    36 FTGFVKRNYRFLLHLPITFTFIGLMWLE-----AFISSNLEQ-----AGQVL---------YMSI 81

  Fly    95 VKVAITYSML---------WRLI-KAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIFTFVY- 148
            .::|:...:|         |||: :.::..|.      .:..:|::.. ..|....|..|.::| 
  Fly    82 TEMALVVKILSIWHYRTEAWRLMYELQHAPDY------QLHNQEEVDF-WRREQRFFKWFFYIYI 139

  Fly   149 -----CGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLWVASTLEYMVMSGAVLQDQLSDSYP 208
                 ..|:|.|.:..:.....|:..|.|| :|.: ..:.|.|...:...|:...:.:...|:..
  Fly   140 LISLGVVYSGCTGVLFLEGYELPFAYYVPF-EWQN-ERRYWFAYGYDMAGMTLTCISNITLDTLG 202

  Fly   209 LIYTLILRAHLDMLRERI-RRLRSDENLSEAESYEELVKCV-MDHKLILRYCAIIKPVIQGTIFT 271
            ..:..    |:.:|...: .|||..:|:.....:.:.::.: :.|:.|.......:.::...|.:
  Fly   203 CYFLF----HISLLYRLLGLRLRETKNMKNDTIFGQQLRAIFIMHQRIRSLTLTCQRIVSPYILS 263

  Fly   272 QFLLIGLVL---GFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQ 333
            |.:|..|::   |:.|.:|....:....|:...||..::||.:..||..|.|......||:.::.
  Fly   264 QIILSALIICFSGYRLQHVGIRDNPGQFISMLQFVSVMILQIYLPCYYGNEITVYANQLTNEVYH 328

  Fly   334 SNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMNIAD 394
            :||::.....:..|..:::::::|:...||..|.:.:...:.....|:|.:.:.  :|:::
  Fly   329 TNWLECRPPIRKLLNAYMEHLKKPVTIRAGNFFAVGLPIFVKTINNAYSFLALL--LNVSN 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 60/325 (18%)
Or94aNP_524455.1 7tm_6 69..376 CDD:251636 61/333 (18%)

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