DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or85f

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524289.1 Gene:Or85f / 41119 FlyBaseID:FBgn0037685 Length:392 Species:Drosophila melanogaster


Alignment Length:373 Identity:78/373 - (20%)
Similarity:146/373 - (39%) Gaps:95/373 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    86 VCINAYGSSVKVAITYSMLWRLIKAKNI-------------------------------LDQLDL 119
            :|:.::|..|.|     |::|:::||.|                               :..|:.
  Fly    45 LCLASHGVCVGV-----MVFRMVEAKTIDNVSLIMRYATLVTYIINSDTKFATVLQRSAIQSLNS 104

  Fly   120 RCTAMEEREKIHLVVARSNHAFLIFTFVYCG--YAGST-------YLSSVLSGRP---------- 165
            :...:..:..:..:..|.|..:...:|||..  |.||:       .::|:::...          
  Fly   105 KLAELYPKTTLDRIYHRVNDHYWTKSFVYLVIIYIGSSIMVVIGPIITSIIAYFTHNVFTYMHCY 169

  Fly   166 PWQLYNPFIDWHDGTLKLWV---ASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIR 227
            |:.||:|..|      .:|:   ...||::..:..|:.:..:|.:.|.:.:.:..|   .|..||
  Fly   170 PYFLYDPEKD------PVWIYISIYALEWLHSTQMVISNIGADIWLLYFQVQINLH---FRGIIR 225

  Fly   228 RLRSDENLSEAESYEELVKCVMDHKLILR------YCAIIKPVIQGTIFTQFLLIGL-------- 278
            .| :|...|.....|       |.|.|.:      :...::..:.| ||.:.||:.|        
  Fly   226 SL-ADHKPSVKHDQE-------DRKFIAKIVDKQVHLVSLQNDLNG-IFGKSLLLSLLTTAAVIC 281

  Fly   279 -VLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRR 342
             |..:|||.    .....|....:|:.|.::|.:..||....:::....:.||::..::.|||..
  Fly   282 TVAVYTLIQ----GPTLEGFTYVIFIGTSVMQVYLVCYYGQQVLDLSGEVAHAVYNHDFHDASIA 342

  Fly   343 YKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQM 390
            ||..||..:...|||:...|.|...||:.:...:...::.|||:..||
  Fly   343 YKRYLLIIIIRAQQPVELNAMGYLSISLDTFKQLMSVSYRVITMLMQM 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 73/362 (20%)
Or85fNP_524289.1 7tm_6 68..381 CDD:251636 64/334 (19%)

Return to query results.
Submit another query.