DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or83c

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524244.2 Gene:Or83c / 40744 FlyBaseID:FBgn0037399 Length:397 Species:Drosophila melanogaster


Alignment Length:430 Identity:85/430 - (19%)
Similarity:158/430 - (36%) Gaps:112/430 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 RSRDGCIYLYRAMKFIG--WLPPKQGVLRYVYLTWT----LMTFVWCTTYLPL--------GFLG 66
            |.|:...|:......:|  :|.||   |::.|.|||    :..:...|.:..|        |...
  Fly    10 RFRELSKYINSLTNLLGVDFLSPK---LKFNYRTWTTIFAIANYTGFTVFTILNNGGDWRVGLKA 71

  Fly    67 SYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWRLI-KAKNILDQLDLRCTAMEEREKI 130
            |.||.......|:|||.|              :.:..:.||: .:::|.|:.:.|      .:..
  Fly    72 SLMTGGLFHGLGKFLTCL--------------LKHQDMRRLVLYSQSIYDEYETR------GDSY 116

  Fly   131 HLVVARSNHAFLI---------FTFVYC----------GYAGS--TYLSSVLSGRPPWQLYNPFI 174
            |..: .||...|:         :.|.:|          .|.|:  |.:..::.|.|   |.|.: 
  Fly   117 HRTL-NSNIDRLLGIMKIIRNGYVFAFCLMELLPLAMLMYDGTRVTAMQYLIPGLP---LENNY- 176

  Fly   175 DWHDGTLKLWVASTLEYMVMSGAVLQDQL----SDSYPLIYTLILRAHLDMLRERIRRLRSDENL 235
                       ...:.||:.:..:|...:    .|.:..:....:....|||:.:::.|  ::.|
  Fly   177 -----------CYVVTYMIQTVTMLVQGVGFYSGDLFVFLGLTQILTFADMLQVKVKEL--NDAL 228

  Fly   236 SEAESYEELV-------------KCVMD----HKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFT 283
            .:...|..||             :.::|    |:|...||..|..:....|.||.|.:.|.:..:
  Fly   229 EQKAEYRALVRVGASIDGAENRQRLLLDVIRWHQLFTDYCRAINALYYELIATQVLSMALAMMLS 293

  Fly   284 L-INVFFF---SDIWTGIASFMFVITILLQT-FPFCYTCNLIMEDCESLTHAIFQSNWVDASRRY 343
            . ||:..|   |.|:..::::...|..:|.| ..|.|         :.:..:|....|.:.|...
  Fly   294 FCINLSSFHMPSAIFFVVSAYSMSIYCILGTILEFAY---------DQVYESICNVTWYELSGEQ 349

  Fly   344 KTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSV 383
            :....:.|:..|.|......|:..:|:.:.:.:.|..:||
  Fly   350 RKLFGFLLRESQYPHNIQILGVMSLSVRTALQIVKLIYSV 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 65/352 (18%)
Or83cNP_524244.2 7tm_6 69..387 CDD:251636 68/364 (19%)

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