DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or74a

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_524123.1 Gene:Or74a / 39929 FlyBaseID:FBgn0036709 Length:404 Species:Drosophila melanogaster


Alignment Length:443 Identity:95/443 - (21%)
Similarity:164/443 - (37%) Gaps:135/443 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 IYLYRAMKFIGW-LPPKQGVLRYVYLTWT-----LMTFVWCTTYLPLGFL--------------- 65
            :.|||.:..:.| |..:.|       .||     ||.|        ||||               
  Fly    22 VSLYRVLNHVAWPLEAESG-------RWTVFLDRLMIF--------LGFLVFCEHNEVDFHYLIA 71

  Fly    66 -----GSYMTQIKSFSPGEFLTSLQV-CINAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAM 124
                 .:.:|.:.::.   .|..:|: |             :.:.|...:.:.:|.:........
  Fly    72 NRQDMDNMLTGLPTYL---ILVEMQIRC-------------FQLAWHKDRFRALLQRFYAEIYVS 120

  Fly   125 EEREKIHLV--VARSNHAFLIFTFVYCGYAGSTYL---SSVLSGRPPW---QLYNPFIDWHDGT- 180
            ||.|. ||.  :.|...|..:.:.||.....:.:|   ::|:..|...   |:| ||    |.| 
  Fly   121 EEMEP-HLFASIQRQMLATRVNSTVYLLALLNFFLVPVTNVIYHRREMLYKQVY-PF----DNTQ 179

  Fly   181 ---------LKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRR-----LRS 231
                     |..||...:..|:.....:..:|        .:.|.|....|.:.:||     |:.
  Fly   180 LHFFIPLLVLNFWVGFIITSMLFGELNVMGEL--------MMHLNARYIQLGQDLRRSAQMLLKK 236

  Fly   232 DENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLL-IGLVLGFT---LINVFF--F 290
            ..:|:.|.:|    :..:.|  |||..|.::...| .:..:|.| |.::..|:   |..:||  |
  Fly   237 SSSLNVAIAY----RLNLTH--ILRRNAALRDFGQ-RVEKEFTLRIFVMFAFSAGLLCALFFKAF 294

  Fly   291 SDIWTGI-------ASFMFVI------TILLQTFP----FCYTCNLIMEDCESLTHAIFQSNWVD 338
            ::.|..:       |.||.::      :|||:|..    ..||.     |.|.:.|   ||:.|.
  Fly   295 TNPWGNVAYIVWFLAKFMELLALGMLGSILLKTTDELGMMYYTA-----DWEQVIH---QSDNVG 351

  Fly   339 ASRRYKTTLLYFLQNVQQPIVFIAG-GIFQISMSSNISVAKFAFSVITITKQM 390
            .:.:....:...:|...:|. ||.| ..|::|:::.:.:.:.|||..|....|
  Fly   352 ENVKLMKLVTLAIQLNSRPF-FITGLNYFRVSLTAVLKIIQGAFSYFTFLNSM 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 74/352 (21%)
Or74aNP_524123.1 7tm_6 75..394 CDD:251636 75/364 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465959
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

Return to query results.
Submit another query.