DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or59c

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523823.1 Gene:Or59c / 37716 FlyBaseID:FBgn0034866 Length:411 Species:Drosophila melanogaster


Alignment Length:398 Identity:177/398 - (44%)
Similarity:255/398 - (64%) Gaps:1/398 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FELIRPAPLTEQKRSRDGCIYLYRAMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGS 67
            |:.::.|||.::..|.|...|.||...|:||.|||..:||::|..|||.|......|||||...:
  Fly     6 FKRLQTAPLDQEVSSLDASDYYYRIAFFLGWTPPKGALLRWIYSLWTLTTMWLGIVYLPLGLSLT 70

  Fly    68 YMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIHL 132
            |:.....|:|.||||||||.||..|:.:|..:|||.:||..:...::..||.||....:|...|.
  Fly    71 YVKHFDRFTPTEFLTSLQVDINCIGNVIKSCVTYSQMWRFRRMNELISSLDKRCVTTTQRRIFHK 135

  Fly   133 VVARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLWVASTLEYMVMSGA 197
            :|||.|...::|...|.|:...|..:||.:|:.|||||||.:||..|..:||:||.|||.|:|..
  Fly   136 MVARVNLIVILFLSTYLGFCFLTLFTSVFAGKAPWQLYNPLVDWRKGHWQLWIASILEYCVVSIG 200

  Fly   198 VLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIK 262
            .:|:.:||:|.:::..:.|.||.:||:||..||.|..|||.|.||::|.|:.||:.|::...||:
  Fly   201 TMQELMSDTYAIVFISLFRCHLAILRDRIANLRQDPKLSEMEHYEQMVACIQDHRTIIQCSQIIR 265

  Fly   263 PVIQGTIFTQFLLIGLVLGFTLINVFFF-SDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCES 326
            |::..|||.||:|:|:.||...|::.|| :.|||.:|:..|::.|..::||.|..|..::||...
  Fly   266 PILSITIFAQFMLVGIDLGLAAISILFFPNTIWTIMANVSFIVAICTESFPCCMLCEHLIEDSVH 330

  Fly   327 LTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMN 391
            :::|:|.|||:.|.|.||:.:||||...||||.|.||.||.||:.|||:||||||::|||..|||
  Fly   331 VSNALFHSNWITADRSYKSAVLYFLHRAQQPIQFTAGSIFPISVQSNIAVAKFAFTIITIVNQMN 395

  Fly   392 IADKFKTD 399
            :.:||.:|
  Fly   396 LGEKFFSD 403

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 137/305 (45%)
Or59cNP_523823.1 7tm_6 79..385 CDD:251636 137/305 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468535
Domainoid 1 1.000 64 1.000 Domainoid score I17159
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 76 1.000 Inparanoid score I7489
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D31412at7147
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 1 1.000 - - otm50671
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
88.000

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