DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or59a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523821.1 Gene:Or59a / 37711 FlyBaseID:FBgn0026384 Length:379 Species:Drosophila melanogaster


Alignment Length:385 Identity:89/385 - (23%)
Similarity:174/385 - (45%) Gaps:42/385 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 YRAMKFIG--------WLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFL 81
            :.|.:::|        |        :.:|:.:::::.:..|...|: .||..:.:.::.:  |.:
  Fly    16 WTAWRYLGVAHFRVENW--------KNLYVFYSIVSNLLVTLCYPV-HLGISLFRNRTIT--EDI 69

  Fly    82 TSLQVCINAYGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIFTF 146
            .:|.........|||..:....:..:::.:.:|..||.|....|:|.....|..:..:...:|..
  Fly    70 LNLTTFATCTACSVKCLLYAYNIKDVLEMERLLRLLDERVVGPEQRSIYGQVRVQLRNVLYVFIG 134

  Fly   147 VY--CG-YAGSTYLSSVLSG--RPPWQLYNPFIDWHDGTLKLWVASTLEYMVMSGAVLQDQLSDS 206
            :|  |. :|..::|.....|  .|.|   .|| ||...|...::|:..:.:.:|..:||:.:||.
  Fly   135 IYMPCALFAELSFLFKEERGLMYPAW---FPF-DWLHSTRNYYIANAYQIVGISFQLLQNYVSDC 195

  Fly   207 YPLIYTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFT 271
            :|.:...::.:|:.||..|...:..|. ..:||  ::|..|:.|||.||.....|:..|...:..
  Fly   196 FPAVVLCLISSHIKMLYNRFEEVGLDP-ARDAE--KDLEACITDHKHILELFRRIEAFISLPMLI 257

  Fly   272 QFLL--IGLVLGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCE----SLTHA 330
            ||.:  :.:.:|...: |||.|:....:....:.:.:.||.||.|:    ...|.|    .|.:|
  Fly   258 QFTVTALNVCIGLAAL-VFFVSEPMARMYFIFYSLAMPLQIFPSCF----FGTDNEYWFGRLHYA 317

  Fly   331 IFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQM 390
            .|..||...:|.:|..::.|::...:....:|||:.:|.:.:..|..|.|:|:.||..:|
  Fly   318 AFSCNWHTQNRSFKRKMMLFVEQSLKKSTAVAGGMMRIHLDTFFSTLKGAYSLFTIIIRM 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 76/315 (24%)
Or59aNP_523821.1 7tm_6 64..368 CDD:251636 76/317 (24%)

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