DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or47a

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523689.1 Gene:Or47a / 36187 FlyBaseID:FBgn0026386 Length:385 Species:Drosophila melanogaster


Alignment Length:248 Identity:59/248 - (23%)
Similarity:103/248 - (41%) Gaps:22/248 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 LSSVLSGRPPWQLYNPF---IDWHDGTLKLWVASTL-EYMVMSGAVLQDQLSDSYPLIYTLILRA 217
            ||..|:|....:|  ||   ..|:...::.:|.|.: .....:|.||.....|:....:|..|.|
  Fly   147 LSYWLAGHAEPEL--PFPCLFPWNIHIIRNYVLSFIWSAFASTGVVLPAVSLDTIFCSFTSNLCA 209

  Fly   218 HLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGL---V 279
            ...:.:.::.|.:..   |..||...|.|....::..|..|..:....|..|..||.:..|   :
  Fly   210 FFKIAQYKVVRFKGG---SLKESQATLNKVFALYQTSLDMCNDLNQCYQPIICAQFFISSLQLCM 271

  Fly   280 LGFTLINVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVD------ 338
            ||: |.::.|...  .|:....|:.||::|.:.:||....:..:..|...||:.|.|.:      
  Fly   272 LGY-LFSITFAQT--EGVYYASFIATIIIQAYIYCYCGENLKTESASFEWAIYDSPWHESLGAGG 333

  Fly   339 ASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMN 391
            ||.....:||..:....:.. .|.|..|:.:|.:..|:.:.|.|.||:.:..:
  Fly   334 ASTSICRSLLISMMRAHRGF-RITGYFFEANMEAFSSIVRTAMSYITMLRSFS 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 55/236 (23%)
Or47aNP_523689.1 7tm_6 56..375 CDD:251636 55/236 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465572
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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