DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or45a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523666.3 Gene:Or45a / 35958 FlyBaseID:FBgn0033404 Length:378 Species:Drosophila melanogaster


Alignment Length:413 Identity:83/413 - (20%)
Similarity:157/413 - (38%) Gaps:99/413 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 RAMKFIGWLP--PKQGVLRYVY---LTWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQ 85
            ||::.:|:.|  |:..:...::   |..:|::..|......|..| |.:|::..    .|...:|
  Fly    11 RALEIVGFDPSTPQLSLKHPIWAGILILSLISHNWPMVVYALQDL-SDLTRLTD----NFAVFMQ 70

  Fly    86 VCINAYGSSVKVAITYSMLWRLIKAKNI------LDQLDLRCTA-------MEEREKIHLVVARS 137
                  ||.    .|:..|..:.|.:.|      |.:|:...:|       :|...::...||||
  Fly    71 ------GSQ----STFKFLVMMAKRRRIGSLIHRLHKLNQAASATPNHLEKIERENQLDRYVARS 125

  Fly   138 --NHAFLIFTFVYCGYAGSTYLSSV--------------------LSGRPPWQLYNPFIDWHDGT 180
              |.|:    .|.|..|.:..|..:                    |..|.| ..|.|...|  |.
  Fly   126 FRNAAY----GVICASAIAPMLLGLWGYVETGVFTPTTPMEFNFWLDERKP-HFYWPIYVW--GV 183

  Fly   181 LKL----WVA---STLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEA 238
            |.:    |:|   .||...:....|:|.||               |:::.|       :::|:..
  Fly   184 LGVAAAAWLAIATDTLFSWLTHNVVIQFQL---------------LELVLE-------EKDLNGG 226

  Fly   239 ESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASF--M 301
            :|  .|...|..|::.|.....:..:....:|.:::|..|.|  .::...|....|:....|  .
  Fly   227 DS--RLTGFVSRHRIALDLAKELSSIFGEIVFVKYMLSYLQL--CMLAFRFSRSGWSAQVPFRAT 287

  Fly   302 FVITILLQTFPFCYTCNLIMEDCESLTHAIF-QSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGI 365
            |::.|::|...:||....|.:...::..|:: |.||.:.:.:.:......:...|:| ..|.|.:
  Fly   288 FLVAIIIQLSSYCYGGEYIKQQSLAIAQAVYGQINWPEMTPKKRRLWQMVIMRAQRP-AKIFGFM 351

  Fly   366 FQISMSSNISVAKFAFSVITITK 388
            |.:.:...:.|.:.|.|.:.:.:
  Fly   352 FVVDLPLLLWVIRTAGSFLAMLR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 69/349 (20%)
Or45aNP_523666.3 7tm_6 64..367 CDD:251636 69/346 (20%)

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