DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or43a

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523647.2 Gene:Or43a / 35644 FlyBaseID:FBgn0026389 Length:376 Species:Drosophila melanogaster


Alignment Length:411 Identity:75/411 - (18%)
Similarity:149/411 - (36%) Gaps:122/411 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 KFIGWLP-PKQGVLRYVYL--------TWTLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSL 84
            ||...|| ....::::|||        .:.|..|.:...:..|  :.:::..||.....|||..|
  Fly    32 KFAFVLPVTAMNLMQFVYLLRMWGDLPAFILNMFFFSAIFNAL--MRTWLVIIKRRQFEEFLGQL 94

  Fly    85 QVCINAYGSSVKVAITYSMLWRLIKAKNILDQLD------LRCTAMEEREKIHLVVARSNHAFL- 142
            ....:                      :|||..|      ||   ..|||..:|.:...:.:|| 
  Fly    95 ATLFH----------------------SILDSTDEWGRGILR---RAEREARNLAILNLSASFLD 134

  Fly   143 -------------------------------IFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDW 176
                                           ::..:|.....:..|.|:        :|.||:..
  Fly   135 IVGALVSPLFREERAHPFGLALPGVSMTSSPVYEVIYLAQLPTPLLLSM--------MYMPFVSL 191

  Fly   177 HDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRLRSDENLSEAESY 241
            ..|            :.:.|                   :|.|.:|..|:.::..:|. ||.|.:
  Fly   192 FAG------------LAIFG-------------------KAMLQILVHRLGQIGGEEQ-SEEERF 224

  Fly   242 EELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTG----IASFMF 302
            :.|..|:..|..::||...:..::...:..:.::.|.:    :.::.|..:|.|.    |:..|:
  Fly   225 QRLASCIAYHTQVMRYVWQLNKLVANIVAVEAIIFGSI----ICSLLFCLNIITSPTQVISIVMY 285

  Fly   303 VITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQ 367
            ::|:|...|.:....|.|..:...:..|::...|.:|..|::.|||.||...|.|:....|.::.
  Fly   286 ILTMLYVLFTYYNRANEICLENNRVAEAVYNVPWYEAGTRFRKTLLIFLMQTQHPMEIRVGNVYP 350

  Fly   368 ISMSSNISVAKFAFSVITITK 388
            ::::...|:...::|..|:.:
  Fly   351 MTLAMFQSLLNASYSYFTMLR 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 61/346 (18%)
Or43aNP_523647.2 7tm_6 56..364 CDD:251636 66/378 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465785
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.940

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