DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or35a

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_723916.1 Gene:Or35a / 34918 FlyBaseID:FBgn0028946 Length:409 Species:Drosophila melanogaster


Alignment Length:240 Identity:45/240 - (18%)
Similarity:82/240 - (34%) Gaps:88/240 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   132 LVVARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQL------YNPFIDWHDGTLKLWVASTLE 190
            |.|.|.||.|                         |.|      :..::|     ..|.||.:|.
  Fly    20 LAVFRLNHIF-------------------------WPLDPSTGKWGRYLD-----KVLAVAMSLV 54

  Fly   191 YMVMSGAVLQ-----------DQLSDSYPLIYTLILRA---------HLDMLRERIRRLRSDENL 235
            :|..:.|.|:           |......| .|.:::.|         |.:.|::.:....::..:
  Fly    55 FMQHNDAELRYLRFEASNRNLDAFLTGMP-TYLILVEAQFRSLHILLHFEKLQKFLEIFYANIYI 118

  Fly   236 SEAESYEELVKCVMDHKLILR------YCAIIKPVIQGTIF-----TQFLLIGLVLGFTLINVFF 289
            ...:..|...|  :|.|:|:.      |.|:|...:...:|     ::..|..::..|....::.
  Fly   119 DPRKEPEMFRK--VDGKMIINRLVSAMYGAVISLYLIAPVFSIINQSKDFLYSMIFPFDSDPLYI 181

  Fly   290 F-----SDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTH 329
            |     :::|.|         |::.|..|..| ||:   ||.:.|
  Fly   182 FVPLLLTNVWVG---------IVIDTMMFGET-NLL---CELIVH 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 45/240 (19%)
Or35aNP_723916.1 7tm_6 74..393 CDD:251636 29/156 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45465958
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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