DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Or42b and Or23a

DIOPT Version :9

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_523458.3 Gene:Or23a / 33450 FlyBaseID:FBgn0026395 Length:379 Species:Drosophila melanogaster


Alignment Length:381 Identity:89/381 - (23%)
Similarity:178/381 - (46%) Gaps:36/381 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 AMKFIGWLPPKQGVLRYVYLTWTLMTFVWCTTYLPLGFLGSYMTQIKSF-SPGEFLTSLQVCINA 90
            |.:..|.|...:|    .|.:|:::..:  ..|||...|   :..:.|| .|.|...||.:.:.:
  Fly    18 AWRICGALDLSEG----RYWSWSMLLCI--LVYLPTPML---LRGVYSFEDPVENNFSLSLTVTS 73

  Fly    91 YGSSVKVAITYSMLWRLIKAKNILDQLDLRCTAMEEREK-----IHLVVARSNHAF-----LIFT 145
            ..:.:|..:..:.|.::::.::::.|||.|.:...:.|:     .||:  |.:..|     ::|.
  Fly    74 LSNLMKFCMYVAQLTKMVEVQSLIGQLDARVSGESQSERHRNMTEHLL--RMSKLFQITYAVVFI 136

  Fly   146 FVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKLWVASTLEYMVMSGAVLQDQLSDSYPLI 210
            .....:...|.||.      |..::.|| ||.:..:....|...:.:.....::|...:||:|.:
  Fly   137 IAAVPFVFETELSL------PMPMWFPF-DWKNSMVAYIGALVFQEIGYVFQIMQCFAADSFPPL 194

  Fly   211 YTLILRAHLDMLRERIRRLRSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLL 275
            ...::.....:|..||..:.......| |:.::||.|:.|...:.|...:.|.::...:..||::
  Fly   195 VLYLISEQCQLLILRISEIGYGYKTLE-ENEQDLVNCIRDQNALYRLLDVTKSLVSYPMMVQFMV 258

  Fly   276 IGLVLGFTL-INVFFFSDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDA 339
            ||:.:..|| :.:|:...::..|....|::.|.:||:|.||...::.|....|.:|:|.|||||.
  Fly   259 IGINIAITLFVLIFYVETLYDRIYYLCFLLGITVQTYPLCYYGTMVQESFAELHYAVFCSNWVDQ 323

  Fly   340 SRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMNIADK 395
            |..|:..:|...:..::..:.:||.:..|.:|:.::..|.|:|..|:     :||:
  Fly   324 SASYRGHMLILAERTKRMQLLLAGNLVPIHLSTYVACWKGAYSFFTL-----MADR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 72/315 (23%)
Or23aNP_523458.3 7tm_6 59..365 CDD:251636 72/315 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45468669
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0003850
OrthoInspector 1 1.000 - - otm50671
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR21137
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.