Protein Alignment Or42b and Or1a

DIOPT Version :10

• Sequence 1: NP_523624.2
• Gene: Or42b / 35516
• FlyBaseID: FBgn0033043
• Length: 399
• Species: Drosophila melanogaster
• Sequence 2: NP_525029.2
• Gene: Or1a / 30978
• FlyBaseID: FBgn0029521
• Length: 392
• Species: Drosophila melanogaster
• Alignment Length: 435
• Identity: 77/435 - (17%)
• Similarity: 151/435 - (34%)
• Gaps: 142/435 - (32%)

  Fly    35 PPKQG-VLRYVYLTWTLMTFVWC-TTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINA------- 90
            |.|:| |||.     .|:..:.| ||...|..:.::|.|.::        .:.:|..|
  Fly    28 PDKKGNVLRS-----PLLYCIMCLTTSFELCTVCAFMVQNRN--------QIVLCSEALMHGLQM 79

  Fly    91 YGSSVKVAITYSMLWRLIKAKNILDQL----------DLRCT---AMEEREKI-----HLVVARS 137
            ..|.:|:||.      |.|:.:::|.:          ||..|   :..:|.::     .::.|.:
  Fly    80 VSSLLKMAIF------LAKSHDLVDLIQQIQSPFTEEDLVGTEWRSQNQRGQLMAAIYFMMCAGT 138

  Fly   138 NHAFLIF--TFVYCGYAGSTYLSSVLSGRP--PWQLYNPFIDWHDGTLKLWVAS----------T 188
            :.:||:.  ......|..:...:.|.|.|.  |:.:..|.:...|..|.::|.|          |
  Fly   139 SVSFLLMPVALTMLKYHSTGEFAPVSSFRVLLPYDVTQPHVYAMDCCLMVFVLSFFCCSTTGVDT 203

  Fly   189 LEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRL-------RSDENLS---------- 236
            |......|..||.:                  .|.::::|:       |||..||
  Fly   204 LYGWCALGVSLQYR------------------RLGQQLKRIPSCFNPSRSDFGLSGIFVEHARLL 250

  Fly   237 -----------EAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFF 290
                       |....|.::.|.:       ||::|...|.......|..:|           ||
  Fly   251 KIVQHFNYSFMEIAFVEVVIICGL-------YCSVICQYIMPHTNQNFAFLG-----------FF 297

  Fly   291 SDIWTGIASFMFVITILLQTFPFCYTCNLIMEDCESLTHAIFQ-SNWVDASRRYKTTLLYFLQNV 354
            |            :.:..|...:.:....:..:.|..:..::: ..|.:...:::...|:.::..
  Fly   298 S------------LVVTTQLCIYLFGAEQVRLEAERFSRLLYEVIPWQNLPPKHRKLFLFPIERA 350

  Fly   355 QQPIVFIAGGIFQISMSSNISVAKFAFSVITITKQMN-IADKFKT 398
            |:..| :....|::.....:.:.:.|.|..|:   || :..|::|
  Fly   351 QRETV-LGAYFFELGRPLLVWIFRTAGSFTTL---MNALYAKYET 391

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Or42b	NP_523624.2	7tm_6	76..381	CDD:251636	57/372 (15%)
Or1a	NP_525029.2	7tm_6	79..376	CDD:251636	55/351 (16%)