DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and Or46a

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_995793.1 Gene:Or46a / 2768728 FlyBaseID:FBgn0026388 Length:384 Species:Drosophila melanogaster


Alignment Length:414 Identity:83/414 - (20%)
Similarity:156/414 - (37%) Gaps:102/414 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 YVYLTWTLMTF-VWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWR 106
            |.|..|..... ||   .||. :...:..:.:|...|..|..|.:.:        :..::.||..
  Fly     7 YKYQVWYFQILGVW---QLPT-WAADHQRRFQSMRFGFILVILFIML--------LLFSFEMLNN 59

  Fly   107 LIKAKNILD-----QLDLRCTA---------------------------------MEEREKIHLV 133
            :.:.:.||.     ..::.|.|                                 |.|.:::.:|
  Fly    60 ISQVREILKVFFMFATEISCMAKLLHLKLKSRKLAGLVDAMLSPEFGVKSEQEMQMLELDRVAVV 124

  Fly   134 VARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQLYNPFIDWHDGTLKL----------WVAST 188
            ..|:::..:           |...:|::       |..|..| :.|.|.|          |:...
  Fly   125 RMRNSYGIM-----------SLGAASLI-------LIVPCFD-NFGELPLAMLEVCSIEGWICYW 170

  Fly   189 LEYMVMSGAVLQD-QLSDSYPLI-YTLI--LRAHLDMLRERIRRL------RSDENLSEAESYEE 243
            .:|:..|..:|.. .|:.:|..: |:|:  |:..|.||..|:.:|      :.:|.::     .|
  Fly   171 SQYLFHSICLLPTCVLNITYDSVAYSLLCFLKVQLQMLVLRLEKLGPVIEPQDNEKIA-----ME 230

  Fly   244 LVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTLINVFFFSDIWTGIASFM-----FV 303
            |.:|...:..|:|:..:::..|:|....|.:...|||...|.::...| |..|.|.||     :.
  Fly   231 LRECAAYYNRIVRFKDLVELFIKGPGSVQLMCSVLVLVSNLYDMSTMS-IANGDAIFMLKTCIYQ 294

  Fly   304 ITILLQTFPFCYTCNLIMEDCESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIA-GGIFQ 367
            :.:|.|.|..||..|.:......|.|:|:.|.|...:|..:..:|..:|....|::... ...|.
  Fly   295 LVMLWQIFIICYASNEVTVQSSRLCHSIYSSQWTGWNRANRRIVLLMMQRFNSPMLLSTFNPTFA 359

  Fly   368 ISMSSNISVAKFAFSVITITKQMN 391
            .|:.:..|:...::|...:.|::|
  Fly   360 FSLEAFGSIVNCSYSYFALLKRVN 383

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 72/368 (20%)
Or46aNP_995793.1 7tm_6 62..373 CDD:251636 67/335 (20%)

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