DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and LOC1280835

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_320702.2 Gene:LOC1280835 / 1280835 VectorBaseID:AGAMI1_009586 Length:270 Species:Anopheles gambiae


Alignment Length:682 Identity:120/682 - (17%)
Similarity:209/682 - (30%) Gaps:253/682 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   602 PDTLSLKFDFKSSKATAVLAYSEVKTSEGNGFWELRLATDRLSFDLCPDVKSNITHTTYIRIENP 666
            ||| :::.:.:|:....:...:..||...:.|..|.:|.|            ..|||..:.:|  
Mosquito   100 PDT-AIETNKESALHALLFVSNRPKTVAEDYFTMLSIAID------------IFTHTWSLSVE-- 149

  Fly   667 TSWHSIQLTYERNDIKFVVDYRHSVTQMYGLSFNIGDKLIIGSSLKAAAS----------GLVGC 721
                 ||. |......|::..:....|.||....||..|:...|:....:          .::|.
Mosquito   150 -----IQF-YFLVPFIFLLSTKLPGKQQYGYYGVIGLSLVYFYSVPGTVAFNSVFARIWQFMIGM 208

  Fly   722 LRDLKINGVEIEPRYLVKSERVVGDVSLDNCKYVDPCKKPNTCEHGGKCAVKDDGIICDCKDTGY 786
            :..|........|.|.|.|       :||:.:  :.||:..:.|...:|..|:            
Mosquito   209 VVYLLGTTKPTYPHYQVLS-------NLDDEE--EDCKQLLSDEESQECCSKE------------ 252

  Fly   787 IGKNCHFTKFRKTCEELALLGYSKSDVYSIDIDGNGVFPPARVKCDFQSLANATKTIVEHNLPSQ 851
              |.....||.:.....||:.....:|:...:....|.|...:...|..|.:....::.:.:.:.
Mosquito   253 --KFSEILKFSQPVSYFALVILLAINVFPFTLPAGLVRPLVTMGTGFLMLLSEDNLVLSNRILTY 315

  Fly   852 VDVRSATDEDFSFNIQYREFSAEMLQELISHSLYCTQYIKYDC----IKAPLELHSS-------- 904
            :.       |.||::.           ||...:|.  |.|..|    :...|.|.||        
Mosquito   316 IG-------DISFSLY-----------LIHWPIYA--YWKLTCNGSHVLLALALASSIVLAVITY 360

  Fly   905 ----TWFK--------------------------------------SSSNNNTVD-SLGEVKRGT 926
                .|:.                                      ||.:|.|.| :|.:|:|  
Mosquito   361 ETFEKWYLRLTSTSIGILVVALFFINVVVINKDDISDQVNSFGKDISSLDNVTDDMTLDDVER-- 423

  Fly   927 CPCAIGKNCEDLNHSCNCDANLNRWLSDEGYYKEPPNLGITQMYFLQQKNLDEESQGRV-TLGPL 990
                       ||:..:.:.|.|.:.|...|..:...||     :.:...|.:..:.|: |:|  
Mosquito   424 -----------LNYRWSVNDNKNLFTSTCDYENKKSALG-----WCRHTGLPKSGKYRLATIG-- 470

  Fly   991 ECVETNTQKYVVTFTTSQSYIEVPGWRKGDIAF-------SFRTTGEKAILL-FQPPIRSNYPSF 1047
               .:.|..:...|....|| :.....:|. ||       |.::...||... |:..||...|.|
Mosquito   471 ---NSWTANHAKMFYQECSY-KAKSIMQGS-AFGCEPLYPSAQSKMCKANFTDFEQRIRKEKPDF 530

  Fly  1048 MVALTGDYQLTFNFT--LNTGTP------------------------------KTLVIDTNRKLN 1080
                      .|.||  ::.|.|                              |..::|...::|
Mosquito   531 ----------AFIFTRYMSIGAPFPKNVSSFDQDPIYQTMKEQMLKFISNIKYKLYILDALPRIN 585

  Fly  1081 GGEWHKIWIDYNEHHVRFMINTDTRMVDLQPEEEFGPFEGSMFIGGAPTEISKKYTVKQGLIGCF 1145
            .|..:::...:..|       ||...:|            .||:..|..|:::|           
Mosquito   586 RGVINQLAKLFRNH-------TDPVAID------------DMFVRPAEYEMARK----------- 620

  Fly  1146 RGLVVNGEILDIYSFMSVHLSEIIKDCKPSCV 1177
                              ..::::||||..|:
Mosquito   621 ------------------RHAQLVKDCKGKCI 634

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636
LOC1280835XP_320702.2 None
Blue background indicates that the domain is not in the aligned region.

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