DRSC/TRiP Functional Genomics Resources

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Protein Alignment Or42b and LOC1278165

DIOPT Version :10

Sequence 1:NP_523624.2 Gene:Or42b / 35516 FlyBaseID:FBgn0033043 Length:399 Species:Drosophila melanogaster
Sequence 2:XP_061518132.1 Gene:LOC1278165 / 1278165 VectorBaseID:AGAMI1_014248 Length:423 Species:Anopheles gambiae


Alignment Length:403 Identity:74/403 - (18%)
Similarity:153/403 - (37%) Gaps:108/403 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    44 VYLTW-TLMTFVWCTTYLPLGFLGSYMTQIKSFSPGEFLTSLQVCINAYGSSVKVAITYSMLWRL 107
            :.:.| :||..|:|  ::.||.....:.:|::|:..| |..|.:              |::  ..
Mosquito    74 IAIVWGSLMDVVFC--FVTLGIAIQGLAKIEAFTCPE-LNDLHL--------------YNV--AR 119

  Fly   108 IKAKNILDQLDLRCTAMEEREKIHLVVARSNHAFLIFTFVYCGYAGSTYLSSVLSGRPPWQL--- 169
            .||.....::|   .|:.....:.:|..|      ||...:...|.:.|..::|......:|   
Mosquito   120 FKAPPRFPEVD---EALFHTATMCMVFIR------IFAVAFSIVAIAIYSYAILMPLIEHELSLA 175

  Fly   170 ---YNPFIDWHD--GTLKLWVASTLEYMVMSGAVLQDQLSDSYPLIYTLILRAHLDMLRERIRRL 229
               |.||:|:..  |....||...::  |:.|.: .....||..|:..:.....:|::...:::|
Mosquito   176 FGFYLPFVDYRTPVGFAINWVYQFVQ--VLEGCI-GLMACDSCLLVLIMNATGQMDVIIVYLKQL 237

  Fly   230 ----------RSDENLSEAESYEELVKCVMDHKLILRYCAIIKPVIQGTIFTQFLLIGLVLGFTL 284
                      :.||.:  |:..:|:|...::|   .:|...:..:::...|..|   |.:: |.|
Mosquito   238 TLLIDNNHTGQHDEEI--ADIIKEIVLKHLEH---TKYMTDMDKLLKKQFFINF---GCMI-FEL 293

  Fly   285 INVFFFSDIWTGIASFMFVITIL----------------------LQTFP---FCYTC-NLIMED 323
                        :||...|:.::                      :..:|   .|..| |.:..:
Mosquito   294 ------------VASLAIVVRVINHRLRSXSALNNSFSQPSTESQVPWYPGMAICLICTNQLFIN 346

  Fly   324 C----------ESLTHAIFQSNWVDASRRYKTTLLYFLQNVQQPIVFIAGGIFQISMSSNISVAK 378
            |          |.|...|:..||...:.:::.||...|...|.|:| ::.|...|.:.:.:.:.|
Mosquito   347 CALGTFLSSKNEKLVEEIYNVNWYGLTTKHQKTLQQILLTSQHPVV-LSDGFSPIDLFNFVEIYK 410

  Fly   379 FAFSVITITKQMN 391
            ..:|.:.:.::::
Mosquito   411 KIYSYLMVLQKVS 423

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Or42bNP_523624.2 7tm_6 76..381 CDD:251636 64/358 (18%)
LOC1278165XP_061518132.1 None

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